Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav13d-1A0A075B606 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13d-1A0A075B606 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Gm18959-201ENSMUST00000208954 655 ntBASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13d-1A0A075B606 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13d-1A0A075B606 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms