Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-6A0A075B603 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-6A0A075B603 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-6A0A075B603 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-6A0A075B603 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-6A0A075B603 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-6A0A075B603 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms