Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm5408-201ENSMUST00000197998 747 ntBASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-1A0A075B5Z8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm4968-201ENSMUST00000071458 858 ntBASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-1A0A075B5Z8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-1A0A075B5Z8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-1A0A075B5Z8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms