Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm27000-201ENSMUST00000182943 842 ntBASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm26039-201ENSMUST00000158152 144 ntBASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-1A0A075B5Z7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Actl10-202ENSMUST00000226583 1501 ntBASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm9013-201ENSMUST00000132939 882 ntBASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-1A0A075B5Z7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm11355-201ENSMUST00000121120 306 ntBASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav5-1A0A075B5Z7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-1A0A075B5Z7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms