Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Mir1199-201ENSMUST00000117015 119 ntBASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav1A0A075B5Z4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Gm13168-201ENSMUST00000121771 632 ntBASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav1A0A075B5Z4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav1A0A075B5Z4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav1A0A075B5Z4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav1A0A075B5Z4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav1A0A075B5Z4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms