Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-55A0A075B5W6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-55A0A075B5W6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Il3ra-202ENSMUST00000223589 738 ntBASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-55A0A075B5W6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm7791-201ENSMUST00000219066 539 ntBASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm5417-201ENSMUST00000079706 384 ntBASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-55A0A075B5W6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ighv1-55A0A075B5W6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm27463-201ENSMUST00000183569 57 ntBASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Gm37055-201ENSMUST00000191866 133 ntBASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-55A0A075B5W6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms