Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv4A0A075B5I2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Haglr-201ENSMUST00000100000 2085 ntBASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv4A0A075B5I2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv4A0A075B5I2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv4A0A075B5I2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trbv4A0A075B5I2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv4A0A075B5I2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv4A0A075B5I2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms