Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm28433-201ENSMUST00000187085 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28759-201ENSMUST00000187621 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28831-201ENSMUST00000187739 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28200-201ENSMUST00000187778 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28752-201ENSMUST00000188340 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29378-201ENSMUST00000188723 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28569-201ENSMUST00000188748 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28120-201ENSMUST00000188812 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28369-201ENSMUST00000188993 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29037-201ENSMUST00000189092 313 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28909-201ENSMUST00000189406 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm28861-201ENSMUST00000189681 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29180-201ENSMUST00000190003 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29575-201ENSMUST00000190597 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29490-201ENSMUST00000190923 342 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm29469-201ENSMUST00000191448 315 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm37713-201ENSMUST00000191746 198 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm36891-201ENSMUST00000191995 655 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm44353-201ENSMUST00000200618 138 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm44429-201ENSMUST00000203542 186 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm44794-201ENSMUST00000206550 411 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm26447-201ENSMUST00000082448 129 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm25078-201ENSMUST00000082530 107 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm23055-201ENSMUST00000082805 94 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Mir93-201ENSMUST00000083593 88 ntBASIC1.74□□□□□ -2.13
H2afb2S4R1M3 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm22713-201ENSMUST00000116895 130 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm25805-201ENSMUST00000122788 108 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm25113-201ENSMUST00000157185 143 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm16584-201ENSMUST00000159267 189 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm25996-201ENSMUST00000175393 117 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Mir376a-201ENSMUST00000197584 68 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Mir7215-201ENSMUST00000200383 51 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm25589-201ENSMUST00000082502 166 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Gm23970-201ENSMUST00000083319 107 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.73□□□□□ -2.13
H2afb2S4R1M3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Mir669d-201ENSMUST00000104644 121 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm23109-201ENSMUST00000116867 126 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm12351-201ENSMUST00000118727 292 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm23535-201ENSMUST00000157542 106 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm24858-201ENSMUST00000158058 323 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm24501-201ENSMUST00000158452 62 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm24053-201ENSMUST00000158620 105 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Mir28b-201ENSMUST00000175399 80 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm23355-201ENSMUST00000177614 107 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm24799-201ENSMUST00000178431 79 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm23148-201ENSMUST00000180367 107 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Mir7226-201ENSMUST00000184953 60 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm18357-201ENSMUST00000188184 580 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm43993-201ENSMUST00000203972 247 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm25258-201ENSMUST00000083049 107 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.72□□□□□ -2.13
H2afb2S4R1M3 Gm24049-201ENSMUST00000102409 100 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm13711-201ENSMUST00000119708 453 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm13992-201ENSMUST00000120558 156 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm13725-201ENSMUST00000122139 207 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm15281-201ENSMUST00000125181 351 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm24480-201ENSMUST00000157442 103 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 U6.1-201ENSMUST00000157443 101 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm22448-201ENSMUST00000179254 107 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm29665-201ENSMUST00000191457 528 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm36946-201ENSMUST00000192706 435 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm23845-201ENSMUST00000083834 152 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
H2afb2S4R1M3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H2afb2S4R1M3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H2afb2S4R1M3 Gm23232-201ENSMUST00000157300 105 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms