Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm24737-201ENSMUST00000158861 100 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Gm24799-201ENSMUST00000178431 79 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Mir7017-201ENSMUST00000184894 62 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Gm43884-201ENSMUST00000204251 559 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cldn3Q9Z0G9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm23951-201ENSMUST00000104029 132 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Mir1b-201ENSMUST00000117012 122 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm14782-201ENSMUST00000120151 195 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm22447-201ENSMUST00000158155 92 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm29167-201ENSMUST00000190024 377 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm28288-201ENSMUST00000191019 214 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm37579-201ENSMUST00000194291 142 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm43505-201ENSMUST00000200579 139 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm25135-201ENSMUST00000082648 143 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm24152-201ENSMUST00000082764 163 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Gm26329-201ENSMUST00000093723 110 ntBASIC1.65□□□□□ -2.15
Cldn3Q9Z0G9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm24275-201ENSMUST00000116780 146 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm13588-201ENSMUST00000120026 135 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm22598-201ENSMUST00000157600 127 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm23779-201ENSMUST00000157938 64 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm22263-201ENSMUST00000180060 104 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm28408-201ENSMUST00000191557 463 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm44654-201ENSMUST00000208052 329 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm23625-201ENSMUST00000082457 100 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Gm22299-201ENSMUST00000082663 136 ntBASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cldn3Q9Z0G9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm23015-201ENSMUST00000104145 128 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm23010-201ENSMUST00000104151 126 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm12785-201ENSMUST00000122052 172 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm26255-201ENSMUST00000122492 103 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm22221-201ENSMUST00000157362 103 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm23024-201ENSMUST00000158770 292 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Snord87-201ENSMUST00000175437 87 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm25671-201ENSMUST00000178612 105 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm23307-201ENSMUST00000179167 105 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm25286-201ENSMUST00000179790 105 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Mir7050-201ENSMUST00000184636 60 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm5899-201ENSMUST00000071770 270 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm24356-201ENSMUST00000082859 106 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm25937-201ENSMUST00000083912 107 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn3Q9Z0G9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm24079-201ENSMUST00000104352 132 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm11862-201ENSMUST00000119678 659 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm25318-201ENSMUST00000122554 314 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm24390-201ENSMUST00000179578 62 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm43250-201ENSMUST00000196536 273 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm45296-201ENSMUST00000209625 205 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm23412-201ENSMUST00000083017 107 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Gm10360-201ENSMUST00000097219 272 ntBASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cldn3Q9Z0G9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 226.1 ms