Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm26135-201ENSMUST00000101993 72 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm15282-201ENSMUST00000117707 300 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm25985-201ENSMUST00000122677 107 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm24358-201ENSMUST00000158424 288 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Snord50b-201ENSMUST00000178497 72 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm27893-201ENSMUST00000184408 194 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm28344-201ENSMUST00000185704 279 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm18991-201ENSMUST00000209225 746 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col13a1Q9R1N9 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm24122-201ENSMUST00000104107 132 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm22193-201ENSMUST00000116868 76 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm23470-201ENSMUST00000157129 120 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm23592-201ENSMUST00000157859 117 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm22532-201ENSMUST00000158822 140 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm17522-201ENSMUST00000178144 498 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm45116-201ENSMUST00000207392 275 ntBASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col13a1Q9R1N9 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm24126-201ENSMUST00000104111 106 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm24937-201ENSMUST00000122597 134 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm24480-201ENSMUST00000157442 103 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm22606-201ENSMUST00000158290 103 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm22500-201ENSMUST00000158982 99 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm17161-201ENSMUST00000169187 524 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm45288-201ENSMUST00000210236 151 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm25895-201ENSMUST00000083714 100 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.66□□□□□ -1.98
Col13a1Q9R1N9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Mir878-201ENSMUST00000104680 78 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm22678-201ENSMUST00000116974 101 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm23588-201ENSMUST00000157659 99 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm22075-201ENSMUST00000158599 192 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm22666-201ENSMUST00000158717 164 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm29597-201ENSMUST00000188035 308 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm34139-201ENSMUST00000196166 294 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm44024-201ENSMUST00000203008 476 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm25204-201ENSMUST00000082843 106 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.65□□□□□ -1.99
Col13a1Q9R1N9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm22099-201ENSMUST00000157925 123 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm22381-201ENSMUST00000158186 107 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Mir5118-201ENSMUST00000175551 67 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm29553-201ENSMUST00000189692 279 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm18433-202ENSMUST00000195682 196 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Gm43676-201ENSMUST00000197532 540 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Col13a1Q9R1N9 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms