Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm28369-201ENSMUST00000188993 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29037-201ENSMUST00000189092 313 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28861-201ENSMUST00000189681 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28717-201ENSMUST00000189950 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29180-201ENSMUST00000190003 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29575-201ENSMUST00000190597 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29469-201ENSMUST00000191448 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Mir7217-201ENSMUST00000200304 62 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm44063-201ENSMUST00000203307 376 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm40810-201ENSMUST00000219149 253 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm7240-201ENSMUST00000220769 664 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm22678-201ENSMUST00000116974 101 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm12235-201ENSMUST00000118596 170 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm22685-201ENSMUST00000082848 106 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm26164-201ENSMUST00000083793 104 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Mir5624-201ENSMUST00000176635 61 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm36946-201ENSMUST00000192706 435 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm45386-201ENSMUST00000210194 218 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.63□□□□□ -2.15
Scn5aQ9JJV9 Gm24338-201ENSMUST00000104205 127 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm24480-201ENSMUST00000157442 103 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm22654-201ENSMUST00000157874 105 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm25486-201ENSMUST00000158726 63 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm20462-201ENSMUST00000172623 408 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm23060-201ENSMUST00000102345 109 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Mir872-201ENSMUST00000104728 81 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm16242-201ENSMUST00000117741 334 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm24333-201ENSMUST00000175101 84 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Mir7227-201ENSMUST00000200408 59 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm44564-201ENSMUST00000207985 180 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm45313-201ENSMUST00000210584 178 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm25793-201ENSMUST00000083287 107 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Mir301-201ENSMUST00000083655 86 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm23042-201ENSMUST00000083866 101 ntBASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn5aQ9JJV9 Gm14761-201ENSMUST00000121363 262 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm23232-201ENSMUST00000157300 105 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm27396-201ENSMUST00000157708 58 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm26400-201ENSMUST00000175012 85 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm28058-201ENSMUST00000186421 264 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm23451-201ENSMUST00000083328 122 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm25111-201ENSMUST00000116686 147 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm22215-201ENSMUST00000157558 96 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm23760-201ENSMUST00000158350 116 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm24308-201ENSMUST00000177773 114 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.61□□□□□ -2.15
Scn5aQ9JJV9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm24499-201ENSMUST00000158446 104 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm26402-201ENSMUST00000158499 113 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm42570-201ENSMUST00000195937 292 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm43406-201ENSMUST00000200356 334 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.6□□□□□ -2.15
Scn5aQ9JJV9 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms