Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm44976-201ENSMUST00000205543 261 ntBASIC3.28□□□□□ -1.88
Trim39Q9ESN2 Gm8219-201ENSMUST00000218309 242 ntBASIC3.28□□□□□ -1.88
Trim39Q9ESN2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim39Q9ESN2 Gm25006-201ENSMUST00000083813 107 ntBASIC3.28□□□□□ -1.88
Trim39Q9ESN2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22270-201ENSMUST00000104034 132 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Snord100-201ENSMUST00000116836 74 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm11356-201ENSMUST00000118974 192 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25623-201ENSMUST00000157216 108 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25393-201ENSMUST00000157336 285 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22665-201ENSMUST00000158720 275 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22708-201ENSMUST00000158987 103 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm23504-201ENSMUST00000158988 95 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Snord92-201ENSMUST00000175548 85 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25098-201ENSMUST00000177580 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm23356-201ENSMUST00000177610 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24027-201ENSMUST00000177611 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22511-201ENSMUST00000177628 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22630-201ENSMUST00000177781 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm23560-201ENSMUST00000177782 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25462-201ENSMUST00000177833 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm26059-201ENSMUST00000177865 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22255-201ENSMUST00000177933 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25146-201ENSMUST00000177976 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25523-201ENSMUST00000178044 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24585-201ENSMUST00000178104 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22627-201ENSMUST00000178127 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22912-201ENSMUST00000178242 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24866-201ENSMUST00000178338 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22524-201ENSMUST00000178357 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25710-201ENSMUST00000178367 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm23575-201ENSMUST00000178406 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24872-201ENSMUST00000178434 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25646-201ENSMUST00000178527 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22449-201ENSMUST00000178924 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24702-201ENSMUST00000178965 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24206-201ENSMUST00000179011 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24528-201ENSMUST00000179164 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm22909-201ENSMUST00000179190 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm26334-201ENSMUST00000179403 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25463-201ENSMUST00000179405 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm28010-201ENSMUST00000179485 126 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25742-201ENSMUST00000179530 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25209-201ENSMUST00000179576 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm26392-201ENSMUST00000179661 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25230-201ENSMUST00000179740 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm26434-201ENSMUST00000179778 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm25741-201ENSMUST00000179825 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24759-201ENSMUST00000179827 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm24219-201ENSMUST00000179861 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm6801-201ENSMUST00000190697 339 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm23254-201ENSMUST00000097244 79 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim39Q9ESN2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm25169-201ENSMUST00000104190 129 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm23665-201ENSMUST00000158054 62 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm27668-201ENSMUST00000184188 120 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm42719-201ENSMUST00000197393 355 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm43264-201ENSMUST00000202284 325 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm44024-201ENSMUST00000203008 476 ntBASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim39Q9ESN2 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Snord64-201ENSMUST00000104003 67 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Gm24650-201ENSMUST00000157105 103 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Gm44358-201ENSMUST00000196301 98 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Gm24977-201ENSMUST00000083106 163 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Snord15a-201ENSMUST00000083888 148 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Trim39Q9ESN2 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.25□□□□□ -1.89
Trim39Q9ESN2 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm12458-201ENSMUST00000119387 495 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm26091-201ENSMUST00000122704 82 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm23084-201ENSMUST00000157850 114 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm27648-201ENSMUST00000184315 107 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm43381-201ENSMUST00000198553 165 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Mir201-201ENSMUST00000083470 66 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Mir132-201ENSMUST00000083603 66 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Mir369-201ENSMUST00000083627 79 ntBASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim39Q9ESN2 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms