Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Gm45859-201ENSMUST00000212794 214 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24423-201ENSMUST00000101982 106 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23980-201ENSMUST00000157135 158 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22215-201ENSMUST00000157558 96 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm6788-201ENSMUST00000166459 270 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24818-201ENSMUST00000175093 161 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24415-201ENSMUST00000180218 107 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm29005-201ENSMUST00000186773 320 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Gm24042-201ENSMUST00000083114 103 ntBASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Nkx2-4Q9EQM3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Mir881-201ENSMUST00000104844 78 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23258-201ENSMUST00000158319 106 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25012-201ENSMUST00000158396 164 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm27545-201ENSMUST00000184755 202 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm29167-201ENSMUST00000190024 377 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm26265-201ENSMUST00000083277 135 ntBASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Nkx2-4Q9EQM3 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Mir878-201ENSMUST00000104680 78 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25316-201ENSMUST00000116826 118 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm14846-201ENSMUST00000121868 216 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm23982-201ENSMUST00000157141 106 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25664-201ENSMUST00000157697 107 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm20630-201ENSMUST00000177387 551 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm27540-201ENSMUST00000184950 187 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm44408-201ENSMUST00000200205 66 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Gm25410-201ENSMUST00000083758 137 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.47□□□□□ -2.01
Nkx2-4Q9EQM3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.46□□□□□ -2.01
Nkx2-4Q9EQM3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm23013-201ENSMUST00000104146 106 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm12042-201ENSMUST00000120479 301 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm14215-201ENSMUST00000120578 221 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm15365-201ENSMUST00000122392 300 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm22321-201ENSMUST00000157152 104 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm25749-201ENSMUST00000175485 111 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm28627-201ENSMUST00000186141 453 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm25930-201ENSMUST00000082785 107 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.46□□□□□ -2.02
Nkx2-4Q9EQM3 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm9009-201ENSMUST00000117321 326 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm12351-201ENSMUST00000118727 292 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm22800-201ENSMUST00000175627 94 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm3852-201ENSMUST00000182781 264 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Mir6540-201ENSMUST00000184886 108 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm26265-202ENSMUST00000196326 133 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.45□□□□□ -2.02
Nkx2-4Q9EQM3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm25421-201ENSMUST00000104218 164 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm23705-201ENSMUST00000104370 130 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm11786-201ENSMUST00000120799 155 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm22450-201ENSMUST00000179641 107 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm17067-202ENSMUST00000180131 123 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm25473-201ENSMUST00000180191 107 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm27898-201ENSMUST00000183987 80 ntBASIC2.44□□□□□ -2.02
Nkx2-4Q9EQM3 Gm28453-203ENSMUST00000187041 189 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms