Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm20613-201ENSMUST00000175828 345 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm30534-201ENSMUST00000217928 207 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm22979-201ENSMUST00000082609 159 ntBASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nkx6-1Q99MA9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm6025-201ENSMUST00000121517 201 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm24691-201ENSMUST00000157762 140 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Mir28b-201ENSMUST00000175399 80 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm26337-201ENSMUST00000178000 79 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm25933-201ENSMUST00000178943 108 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm5010-201ENSMUST00000213131 260 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm19563-201ENSMUST00000222031 270 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm4945-201ENSMUST00000075152 453 ntBASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nkx6-1Q99MA9 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm23655-201ENSMUST00000122627 105 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm22322-201ENSMUST00000157151 111 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm23230-201ENSMUST00000157298 133 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm26403-201ENSMUST00000158500 105 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm23922-201ENSMUST00000178792 79 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm24657-201ENSMUST00000180085 79 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm22996-201ENSMUST00000180236 79 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Mir21b-201ENSMUST00000184317 108 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm29597-201ENSMUST00000188035 308 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm24350-202ENSMUST00000198309 132 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 AF357341-201ENSMUST00000083088 75 ntBASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm23588-201ENSMUST00000157659 99 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm22557-201ENSMUST00000157804 102 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm5224-201ENSMUST00000183060 350 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm23722-201ENSMUST00000083002 130 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.04□□□□□ -1.92
Nkx6-1Q99MA9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Gm22674-201ENSMUST00000104413 131 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Gm22139-201ENSMUST00000158747 105 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Snord92-201ENSMUST00000175548 85 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.03□□□□□ -1.92
Nkx6-1Q99MA9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm26293-201ENSMUST00000104170 84 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm13885-201ENSMUST00000117569 187 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm6952-201ENSMUST00000118629 159 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm26477-201ENSMUST00000122617 323 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm23671-201ENSMUST00000157472 103 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm25888-201ENSMUST00000157778 302 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm24277-201ENSMUST00000158661 104 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Mir3106-201ENSMUST00000175401 82 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm26435-201ENSMUST00000179026 107 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm26126-201ENSMUST00000083188 164 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm24929-201ENSMUST00000083403 139 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm22828-201ENSMUST00000083768 107 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx6-1Q99MA9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms