Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.02□□□□□ -1.93
Ushbp1Q8R370 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm26342-201ENSMUST00000104557 129 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm22227-201ENSMUST00000157356 259 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm26406-201ENSMUST00000158503 124 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm7592-201ENSMUST00000160674 627 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm20718-201ENSMUST00000176058 259 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm6030-201ENSMUST00000078768 402 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm25199-201ENSMUST00000083095 104 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm22744-201ENSMUST00000083444 65 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.01□□□□□ -1.93
Ushbp1Q8R370 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ushbp1Q8R370 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm23472-201ENSMUST00000101806 191 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm25526-201ENSMUST00000104332 132 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm6954-201ENSMUST00000117416 225 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm11285-201ENSMUST00000118443 322 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm25783-201ENSMUST00000122525 190 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm22651-201ENSMUST00000157872 94 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm24497-201ENSMUST00000177868 191 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm27761-201ENSMUST00000184091 131 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm19257-201ENSMUST00000186121 183 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Mir378a-201ENSMUST00000198300 66 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm23444-201ENSMUST00000082922 191 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Gm26495-201ENSMUST00000083152 137 ntBASIC3□□□□□ -1.93
Ushbp1Q8R370 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ushbp1Q8R370 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Mir466k-201ENSMUST00000116774 122 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm14843-201ENSMUST00000119596 212 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm26026-201ENSMUST00000122726 123 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm24892-201ENSMUST00000122747 104 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm25625-201ENSMUST00000157221 96 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm17067-202ENSMUST00000180131 123 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Mir6386-201ENSMUST00000183558 104 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm29167-201ENSMUST00000190024 377 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm44322-201ENSMUST00000196830 115 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm25820-202ENSMUST00000197479 128 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm45013-201ENSMUST00000206883 178 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm18991-201ENSMUST00000209225 746 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm23039-201ENSMUST00000083870 161 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm24164-201ENSMUST00000093663 104 ntBASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ushbp1Q8R370 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm25529-201ENSMUST00000104850 92 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm14215-201ENSMUST00000120578 221 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm25642-201ENSMUST00000175137 66 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm24082-201ENSMUST00000175175 83 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm25615-201ENSMUST00000177836 94 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm25457-201ENSMUST00000179509 107 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Mir6399-201ENSMUST00000184050 84 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm45002-201ENSMUST00000208045 120 ntBASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ushbp1Q8R370 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm24274-201ENSMUST00000116787 124 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm22883-201ENSMUST00000157376 106 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm17052-201ENSMUST00000165496 289 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm28900-201ENSMUST00000185232 156 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm24966-201ENSMUST00000082443 79 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm26265-201ENSMUST00000083277 135 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.97□□□□□ -1.93
Ushbp1Q8R370 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm23013-201ENSMUST00000104146 106 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm25834-201ENSMUST00000158916 101 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm27527-201ENSMUST00000183903 99 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.96□□□□□ -1.94
Ushbp1Q8R370 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms