Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm23889-201ENSMUST00000122689 104 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm24436-201ENSMUST00000157889 302 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm24006-201ENSMUST00000158462 132 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm16584-201ENSMUST00000159267 189 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm27540-201ENSMUST00000184950 187 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm27959-201ENSMUST00000185172 111 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Gm24457-201ENSMUST00000083196 105 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Vps53Q8CCB4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm24670-201ENSMUST00000104154 132 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm12797-201ENSMUST00000118645 273 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm5396-201ENSMUST00000121222 532 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm24892-201ENSMUST00000122747 104 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm22192-201ENSMUST00000175128 85 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm27271-201ENSMUST00000183509 170 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm27699-201ENSMUST00000183553 180 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm29167-201ENSMUST00000190024 377 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm29014-201ENSMUST00000191422 326 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Gm25632-201ENSMUST00000083112 85 ntBASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Vps53Q8CCB4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Mir297a-2-201ENSMUST00000103795 90 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Snord72-201ENSMUST00000104549 81 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Gm29022-201ENSMUST00000190702 225 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Gm45445-201ENSMUST00000209586 232 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.88□□□□□ -1.95
Vps53Q8CCB4 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm22270-201ENSMUST00000104034 132 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm26015-201ENSMUST00000104402 125 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm14073-201ENSMUST00000117344 381 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm6897-201ENSMUST00000117714 138 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm14838-201ENSMUST00000118913 248 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm14758-201ENSMUST00000119104 138 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm25615-201ENSMUST00000177836 94 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm5224-201ENSMUST00000183060 350 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm22978-201ENSMUST00000082607 160 ntBASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Vps53Q8CCB4 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm24126-201ENSMUST00000104111 106 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm14922-201ENSMUST00000121131 163 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm24594-201ENSMUST00000122502 99 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm22382-201ENSMUST00000158185 130 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm28169-201ENSMUST00000190342 345 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Vps53Q8CCB4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Snora36b-201ENSMUST00000104383 132 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm12304-201ENSMUST00000120312 385 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm25390-201ENSMUST00000157341 103 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm28020-201ENSMUST00000157739 67 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm25866-201ENSMUST00000158245 112 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm24210-201ENSMUST00000158263 133 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm25930-201ENSMUST00000082785 107 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Gm26495-201ENSMUST00000083152 137 ntBASIC2.85□□□□□ -1.95
Vps53Q8CCB4 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm14215-201ENSMUST00000120578 221 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm25115-201ENSMUST00000157187 140 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm25720-201ENSMUST00000157503 105 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm23223-201ENSMUST00000158119 127 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm25654-201ENSMUST00000158467 88 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm17067-202ENSMUST00000180131 123 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm43220-201ENSMUST00000199299 282 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm24966-201ENSMUST00000082443 79 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 Gm23247-201ENSMUST00000083373 107 ntBASIC2.84□□□□□ -1.95
Vps53Q8CCB4 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms