Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm13913-201ENSMUST00000121126 260 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm25910-201ENSMUST00000157620 140 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm27592-201ENSMUST00000157729 126 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm22174-201ENSMUST00000175050 125 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm22692-201ENSMUST00000175055 125 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm27634-201ENSMUST00000175060 126 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm22460-201ENSMUST00000175269 124 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm24365-201ENSMUST00000175384 125 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm44310-201ENSMUST00000175424 126 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm22639-201ENSMUST00000175591 125 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm24979-201ENSMUST00000178626 126 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Mir7039-201ENSMUST00000183852 85 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm27792-201ENSMUST00000184031 115 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm27743-201ENSMUST00000185136 126 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim47Q8C0E3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm23509-201ENSMUST00000083080 160 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.9□□□□□ -1.78
Trim47Q8C0E3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim47Q8C0E3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm23202-201ENSMUST00000104376 129 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm44489-201ENSMUST00000104619 97 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm14811-201ENSMUST00000117070 117 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm13076-201ENSMUST00000118041 204 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm14602-201ENSMUST00000118625 340 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm24388-201ENSMUST00000177872 107 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm37330-201ENSMUST00000192606 153 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Mir3068-202ENSMUST00000197755 79 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm44326-201ENSMUST00000198226 101 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm32381-201ENSMUST00000203192 476 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm23850-201ENSMUST00000083830 169 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim47Q8C0E3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm11598-201ENSMUST00000119257 357 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm22380-201ENSMUST00000157479 95 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm22521-201ENSMUST00000158272 134 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm44824-201ENSMUST00000207021 229 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim47Q8C0E3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm22196-201ENSMUST00000116865 109 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm24595-201ENSMUST00000122501 110 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm23326-201ENSMUST00000157419 105 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm22382-201ENSMUST00000158185 130 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Snord92-201ENSMUST00000175548 85 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Mir6993-201ENSMUST00000184912 65 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm28169-201ENSMUST00000190342 345 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm2189-201ENSMUST00000201419 429 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm45429-201ENSMUST00000209527 172 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Trim47Q8C0E3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm23530-201ENSMUST00000104564 137 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm14568-201ENSMUST00000119321 294 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm15365-201ENSMUST00000122392 300 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms