Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm25257-201ENSMUST00000083907 110 ntBASIC3.68□□□□□ -1.82
Usp40Q8BWR4 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm22148-201ENSMUST00000104445 107 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm12086-201ENSMUST00000120863 228 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm24650-201ENSMUST00000157105 103 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm23434-201ENSMUST00000157179 100 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Mir1942-201ENSMUST00000157274 63 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm38298-201ENSMUST00000193578 118 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm37807-201ENSMUST00000194310 190 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm5175-202ENSMUST00000219699 529 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Gm22681-201ENSMUST00000083853 106 ntBASIC3.67□□□□□ -1.82
Usp40Q8BWR4 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp40Q8BWR4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Gm12143-201ENSMUST00000119666 332 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Gm22225-201ENSMUST00000157358 278 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Gm22070-201ENSMUST00000178475 107 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Mir669j-201ENSMUST00000179023 121 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Gm42774-201ENSMUST00000198854 283 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Gm40810-201ENSMUST00000219149 253 ntBASIC3.66□□□□□ -1.82
Usp40Q8BWR4 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Usp40Q8BWR4 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm25889-201ENSMUST00000157775 107 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm22553-201ENSMUST00000157797 295 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm22557-201ENSMUST00000157804 102 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm16111-201ENSMUST00000162128 285 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm27580-201ENSMUST00000183666 149 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm25634-201ENSMUST00000082667 105 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm22622-201ENSMUST00000082870 129 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Usp40Q8BWR4 Gm23337-201ENSMUST00000158959 118 ntBASIC3.64□□□□□ -1.83
Usp40Q8BWR4 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.64□□□□□ -1.83
Usp40Q8BWR4 Mir488-201ENSMUST00000093595 109 ntBASIC3.64□□□□□ -1.83
Usp40Q8BWR4 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.64□□□□□ -1.83
Usp40Q8BWR4 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Usp40Q8BWR4 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp40Q8BWR4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm22033-201ENSMUST00000116947 90 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm13922-201ENSMUST00000119505 156 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm25961-201ENSMUST00000157174 135 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm25444-201ENSMUST00000158999 113 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm26200-201ENSMUST00000180273 79 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm18015-201ENSMUST00000214879 316 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm24030-201ENSMUST00000083931 164 ntBASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Usp40Q8BWR4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm23803-201ENSMUST00000104610 132 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm23492-201ENSMUST00000116837 115 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm22051-201ENSMUST00000117002 127 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm2830-201ENSMUST00000140330 385 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm24075-201ENSMUST00000158175 72 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm22429-201ENSMUST00000158553 130 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm28755-201ENSMUST00000185773 199 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.62□□□□□ -1.83
Usp40Q8BWR4 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC3.62□□□□□ -1.83
Usp40Q8BWR4 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm22620-201ENSMUST00000082700 133 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Usp40Q8BWR4 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm25529-201ENSMUST00000104850 92 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm16186-201ENSMUST00000120132 216 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm25476-201ENSMUST00000175125 185 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Snord53-201ENSMUST00000175146 78 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm22069-201ENSMUST00000179911 107 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm33866-201ENSMUST00000196911 289 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Gm24164-201ENSMUST00000093663 104 ntBASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Usp40Q8BWR4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Usp40Q8BWR4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Snord14c-201ENSMUST00000101927 86 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm24890-201ENSMUST00000104389 102 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm14593-201ENSMUST00000119948 294 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm4468-201ENSMUST00000170206 294 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm25707-201ENSMUST00000175120 96 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm24082-201ENSMUST00000175175 83 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm22108-201ENSMUST00000177961 106 ntBASIC3.6□□□□□ -1.83
Usp40Q8BWR4 Gm24798-201ENSMUST00000179334 106 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms