Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm22956-201ENSMUST00000122520 80 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm23326-201ENSMUST00000157419 105 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm16326-201ENSMUST00000162843 414 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm20438-201ENSMUST00000174441 329 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm27476-201ENSMUST00000183366 104 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm27878-201ENSMUST00000184000 106 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm27700-201ENSMUST00000185003 81 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm37377-201ENSMUST00000191733 304 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm37085-201ENSMUST00000193780 196 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm43563-201ENSMUST00000196761 198 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm45456-201ENSMUST00000210841 243 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm24147-201ENSMUST00000082763 144 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm25204-201ENSMUST00000082843 106 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Snora19-201ENSMUST00000082962 132 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm23658-201ENSMUST00000083233 132 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Rnf220Q6PDX6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.65□□□□□ -1.98
Rnf220Q6PDX6 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Rnf220Q6PDX6 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.65□□□□□ -1.98
Rnf220Q6PDX6 Gm14491-201ENSMUST00000121919 199 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm14564-201ENSMUST00000122159 294 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Mir1967-201ENSMUST00000157789 82 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm18546-201ENSMUST00000197245 676 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm22744-201ENSMUST00000083444 65 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.65□□□□□ -1.99
Rnf220Q6PDX6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm24049-201ENSMUST00000102409 100 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm23609-201ENSMUST00000104542 127 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm12458-201ENSMUST00000119387 495 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm15799-201ENSMUST00000120899 289 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm23983-201ENSMUST00000157142 114 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm22217-201ENSMUST00000157556 313 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm22187-201ENSMUST00000157819 129 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm22651-201ENSMUST00000157872 94 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm25015-201ENSMUST00000158400 128 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm24553-201ENSMUST00000158653 131 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm25748-201ENSMUST00000175487 70 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm27803-201ENSMUST00000183763 119 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm44824-201ENSMUST00000207021 229 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm6109-201ENSMUST00000223297 348 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm10360-201ENSMUST00000097219 272 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.64□□□□□ -1.99
Rnf220Q6PDX6 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm24118-201ENSMUST00000103972 126 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm25424-201ENSMUST00000157612 58 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm24730-201ENSMUST00000158228 117 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm26405-201ENSMUST00000158495 100 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm24277-201ENSMUST00000158661 104 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm23864-201ENSMUST00000177607 107 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Mir6408-201ENSMUST00000183643 91 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm28358-202ENSMUST00000189292 223 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm18617-201ENSMUST00000222311 259 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Gm24453-201ENSMUST00000083346 76 ntBASIC2.63□□□□□ -1.99
Rnf220Q6PDX6 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm22935-201ENSMUST00000103960 104 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm25764-201ENSMUST00000104092 134 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Snord19-201ENSMUST00000104609 76 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm25783-201ENSMUST00000122525 190 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm25935-201ENSMUST00000178746 107 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm22421-201ENSMUST00000083058 107 ntBASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Rnf220Q6PDX6 Mir1951-201ENSMUST00000157981 89 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm26022-201ENSMUST00000158663 108 ntBASIC2.61□□□□□ -1.99
Rnf220Q6PDX6 Gm24837-201ENSMUST00000158683 81 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 146 ms