Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm22560-201ENSMUST00000157332 120 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm23589-201ENSMUST00000157660 105 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm26482-201ENSMUST00000158015 62 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Mir3076-201ENSMUST00000175415 60 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm37007-201ENSMUST00000194234 319 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm37290-201ENSMUST00000195775 339 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm43199-201ENSMUST00000200019 307 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm19244-201ENSMUST00000204340 253 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm23727-201ENSMUST00000083352 164 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.92□□□□□ -1.94
Shkbp1Q6P7W2 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm24892-201ENSMUST00000122747 104 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm25961-201ENSMUST00000157174 135 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm26403-201ENSMUST00000158500 105 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm29005-201ENSMUST00000186773 320 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm37796-201ENSMUST00000195327 134 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm45116-201ENSMUST00000207392 275 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm23095-201ENSMUST00000083446 107 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.91□□□□□ -1.94
Shkbp1Q6P7W2 Gm24276-201ENSMUST00000102181 110 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Mir693-201ENSMUST00000102187 89 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm13801-201ENSMUST00000120750 160 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm24056-201ENSMUST00000158617 146 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm24054-201ENSMUST00000158619 105 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm16546-201ENSMUST00000159442 355 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Mir3103-201ENSMUST00000175474 67 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm20718-201ENSMUST00000176058 259 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm44338-201ENSMUST00000198614 110 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm44256-201ENSMUST00000203304 335 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm26456-201ENSMUST00000082831 111 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Shkbp1Q6P7W2 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm15282-201ENSMUST00000117707 300 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm24291-201ENSMUST00000157633 162 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm24816-201ENSMUST00000175311 151 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm27869-201ENSMUST00000184327 122 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm26265-202ENSMUST00000196326 133 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm42988-201ENSMUST00000198116 225 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm22443-201ENSMUST00000082890 107 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Shkbp1Q6P7W2 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Snord14c-201ENSMUST00000101927 86 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Mir1298-201ENSMUST00000116681 98 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm22139-201ENSMUST00000158747 105 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm22500-201ENSMUST00000158982 99 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm42855-201ENSMUST00000197388 253 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm25789-201ENSMUST00000083294 76 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm24453-201ENSMUST00000083346 76 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.88□□□□□ -1.95
Shkbp1Q6P7W2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm24582-201ENSMUST00000103967 103 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm24440-201ENSMUST00000157236 63 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm22075-201ENSMUST00000158599 192 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm23197-201ENSMUST00000158809 112 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm24512-201ENSMUST00000174963 65 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm29308-201ENSMUST00000188863 315 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm28537-201ENSMUST00000189026 315 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Gm29631-201ENSMUST00000191065 315 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Mir3068-202ENSMUST00000197755 79 ntBASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms