Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm27476-201ENSMUST00000183366 104 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Mir7242-201ENSMUST00000183710 79 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm28992-201ENSMUST00000190534 139 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm43676-201ENSMUST00000197532 540 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm44478-201ENSMUST00000204875 114 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm44563-201ENSMUST00000207958 178 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm44564-201ENSMUST00000207985 180 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.43□□□□□ -1.86
Best3Q6H1V1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.43□□□□□ -1.86
Best3Q6H1V1 Snord82-201ENSMUST00000082889 70 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.43□□□□□ -1.86
Best3Q6H1V1 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Best3Q6H1V1 Gm24283-201ENSMUST00000104233 107 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Mir466k-201ENSMUST00000116774 122 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm25783-201ENSMUST00000122525 190 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm24440-201ENSMUST00000157236 63 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm26105-201ENSMUST00000157253 190 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm22221-201ENSMUST00000157362 103 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm24512-201ENSMUST00000174963 65 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm24573-201ENSMUST00000175499 112 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm44182-201ENSMUST00000204052 115 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.42□□□□□ -1.86
Best3Q6H1V1 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm22248-201ENSMUST00000082482 150 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Gm23461-201ENSMUST00000083265 107 ntBASIC3.42□□□□□ -1.86
Best3Q6H1V1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Best3Q6H1V1 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Mir374b-201ENSMUST00000102314 95 ntBASIC3.41□□□□□ -1.86
Best3Q6H1V1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Gm22483-201ENSMUST00000157986 274 ntBASIC3.41□□□□□ -1.86
Best3Q6H1V1 Mir7013-201ENSMUST00000183540 72 ntBASIC3.41□□□□□ -1.86
Best3Q6H1V1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.41□□□□□ -1.86
Best3Q6H1V1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Best3Q6H1V1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Best3Q6H1V1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Best3Q6H1V1 Gm26247-201ENSMUST00000116702 91 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm26279-201ENSMUST00000157095 102 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm22767-201ENSMUST00000158365 165 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm25015-201ENSMUST00000158400 128 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm17161-201ENSMUST00000169187 524 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm45452-201ENSMUST00000210905 177 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Best3Q6H1V1 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.4□□□□□ -1.87
Best3Q6H1V1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.4□□□□□ -1.87
Best3Q6H1V1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Best3Q6H1V1 Snord72-201ENSMUST00000104549 81 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Snord19-201ENSMUST00000104609 76 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm23988-201ENSMUST00000117034 122 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm14602-201ENSMUST00000118625 340 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm24443-201ENSMUST00000157242 132 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm24291-201ENSMUST00000157633 162 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm23858-201ENSMUST00000158384 106 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm22500-201ENSMUST00000158982 99 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Mir3076-201ENSMUST00000175415 60 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Snord93-201ENSMUST00000175580 71 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm26435-201ENSMUST00000179026 107 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm19118-201ENSMUST00000222554 98 ntBASIC3.39□□□□□ -1.87
Best3Q6H1V1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Best3Q6H1V1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Best3Q6H1V1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm25424-201ENSMUST00000157612 58 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm24681-201ENSMUST00000158760 107 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm17052-201ENSMUST00000165496 289 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm6801-201ENSMUST00000190697 339 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm22421-201ENSMUST00000083058 107 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.38□□□□□ -1.87
Best3Q6H1V1 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Best3Q6H1V1 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Best3Q6H1V1 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm25526-201ENSMUST00000104332 132 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm22151-201ENSMUST00000116963 58 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm16355-201ENSMUST00000128606 231 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm25711-201ENSMUST00000158633 128 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm20718-201ENSMUST00000176058 259 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm23571-201ENSMUST00000180073 127 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm44482-201ENSMUST00000199232 103 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Best3Q6H1V1 Snord47-201ENSMUST00000083034 77 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm22169-201ENSMUST00000083229 107 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Gm25124-201ENSMUST00000083345 164 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Mir471-201ENSMUST00000093596 67 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.37□□□□□ -1.87
Best3Q6H1V1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Best3Q6H1V1 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms