Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mir6406-201ENSMUST00000183592 120 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Gm28008-201ENSMUST00000184021 186 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Gm37338-201ENSMUST00000191986 127 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Gm36946-201ENSMUST00000192706 435 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Mir3961-201ENSMUST00000198795 59 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Sdc3Q64519 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.9□□□□□ -2.11
Sdc3Q64519 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sdc3Q64519 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm9059-201ENSMUST00000118319 183 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm12351-201ENSMUST00000118727 292 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm24783-201ENSMUST00000157639 100 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm23342-201ENSMUST00000158958 115 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm23921-201ENSMUST00000175258 107 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm24799-201ENSMUST00000178431 79 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm7258-201ENSMUST00000179317 300 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm36891-201ENSMUST00000191995 655 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm19901-201ENSMUST00000192191 495 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm44938-201ENSMUST00000208614 427 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm22299-201ENSMUST00000082663 136 ntBASIC1.89□□□□□ -2.11
Sdc3Q64519 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Sdc3Q64519 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sdc3Q64519 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm24098-201ENSMUST00000102075 109 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm25381-201ENSMUST00000102078 109 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm12647-201ENSMUST00000118977 265 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm12924-201ENSMUST00000121747 318 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm15692-201ENSMUST00000152173 352 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm25113-201ENSMUST00000157185 143 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm25658-201ENSMUST00000158472 128 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.88□□□□□ -2.11
Sdc3Q64519 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm24333-201ENSMUST00000175101 84 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm23355-201ENSMUST00000177614 107 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm23148-201ENSMUST00000180367 107 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Mir7026-201ENSMUST00000184384 67 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm24152-201ENSMUST00000082764 163 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Gm25258-201ENSMUST00000083049 107 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Snora33-201ENSMUST00000093556 129 ntBASIC1.88□□□□□ -2.11
Sdc3Q64519 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Sdc3Q64519 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm22193-201ENSMUST00000116868 76 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm11786-201ENSMUST00000120799 155 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Sdc3Q64519 Mir1949-201ENSMUST00000157434 141 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm22338-201ENSMUST00000157715 129 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm24177-201ENSMUST00000158927 131 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Mir3086-201ENSMUST00000175072 87 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm22114-201ENSMUST00000177756 107 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Mir7016-201ENSMUST00000184308 72 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Mir7017-201ENSMUST00000184894 62 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm37713-201ENSMUST00000191746 198 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm26265-202ENSMUST00000196326 133 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm44473-201ENSMUST00000204039 152 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Gm22683-201ENSMUST00000082854 137 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Mir107-201ENSMUST00000083660 87 ntBASIC1.87□□□□□ -2.11
Sdc3Q64519 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc3Q64519 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Sdc3Q64519 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm13992-201ENSMUST00000120558 156 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm16328-201ENSMUST00000126985 196 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm20438-201ENSMUST00000174441 329 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm27271-201ENSMUST00000183509 170 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm27979-201ENSMUST00000185126 56 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm43406-201ENSMUST00000200356 334 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm44909-201ENSMUST00000208756 165 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm24356-201ENSMUST00000082859 106 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm22287-201ENSMUST00000083197 107 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Mir32-201ENSMUST00000083610 70 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm23851-201ENSMUST00000083831 103 ntBASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc3Q64519 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sdc3Q64519 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm23109-201ENSMUST00000116867 126 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Mir1b-201ENSMUST00000117012 122 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm11572-201ENSMUST00000119164 120 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm27905-201ENSMUST00000184005 207 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Mir7009-201ENSMUST00000184519 64 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm44373-201ENSMUST00000196112 169 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm44655-201ENSMUST00000207768 423 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm25813-201ENSMUST00000082748 191 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gm24977-201ENSMUST00000083106 163 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms