Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim28Q62318 Gm24116-201ENSMUST00000103975 107 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm14748-201ENSMUST00000119819 411 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm5967-201ENSMUST00000172723 494 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm27220-201ENSMUST00000183453 262 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm6003-201ENSMUST00000187903 463 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm42647-201ENSMUST00000195939 459 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Mir721-201ENSMUST00000200230 88 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim28Q62318 Gm23722-201ENSMUST00000083002 130 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm23138-201ENSMUST00000083365 103 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Mir384-201ENSMUST00000083565 88 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.25□□□□□ -1.89
Trim28Q62318 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim28Q62318 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim28Q62318 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim28Q62318 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim28Q62318 Gm23651-201ENSMUST00000116755 120 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm14073-201ENSMUST00000117344 381 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm15497-201ENSMUST00000119137 551 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm11414-201ENSMUST00000121795 263 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm16533-201ENSMUST00000140035 228 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm26097-201ENSMUST00000179642 93 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim28Q62318 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim28Q62318 Gm9174-201ENSMUST00000078149 255 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Gm10351-201ENSMUST00000087694 125 ntBASIC3.24□□□□□ -1.89
Trim28Q62318 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim28Q62318 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim28Q62318 Mir878-201ENSMUST00000104680 78 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Gm12304-201ENSMUST00000120312 385 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Gm5396-201ENSMUST00000121222 532 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Gm22217-201ENSMUST00000157556 313 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Mir3075-201ENSMUST00000175340 85 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Gm37693-201ENSMUST00000194562 234 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim28Q62318 Gm6030-201ENSMUST00000078768 402 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Gm22247-201ENSMUST00000082476 131 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim28Q62318 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim28Q62318 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.23□□□□□ -1.89
Trim28Q62318 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Trim28Q62318 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Mdga2-203ENSMUST00000113942 423 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm25805-201ENSMUST00000122788 108 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm23196-201ENSMUST00000158806 107 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim28Q62318 Gm4468-201ENSMUST00000170206 294 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm27369-201ENSMUST00000185182 71 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm28755-201ENSMUST00000185773 199 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Mir6925-201ENSMUST00000197857 70 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Gm45445-201ENSMUST00000209586 232 ntBASIC3.22□□□□□ -1.89
Trim28Q62318 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim28Q62318 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim28Q62318 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim28Q62318 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim28Q62318 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm25494-201ENSMUST00000158143 100 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm25866-201ENSMUST00000158245 112 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm24054-201ENSMUST00000158619 105 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm27869-201ENSMUST00000184327 122 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm37923-201ENSMUST00000191624 161 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm43220-201ENSMUST00000199299 282 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm18502-201ENSMUST00000218679 199 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Gm23723-201ENSMUST00000082996 132 ntBASIC3.21□□□□□ -1.9
Trim28Q62318 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim28Q62318 Gm14069-201ENSMUST00000120815 229 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Gm24210-201ENSMUST00000158263 133 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Mir3106-201ENSMUST00000175401 82 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Gm28344-201ENSMUST00000185704 279 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Gm29603-201ENSMUST00000186792 334 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Gm44476-201ENSMUST00000196225 91 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Gm44903-201ENSMUST00000206840 130 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Mir137-201ENSMUST00000083635 73 ntBASIC3.2□□□□□ -1.9
Trim28Q62318 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim28Q62318 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trim28Q62318 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trim28Q62318 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim28Q62318 Mir1b-201ENSMUST00000117012 122 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm13801-201ENSMUST00000120750 160 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Mir1942-201ENSMUST00000157274 63 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm24726-201ENSMUST00000158232 121 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm25707-201ENSMUST00000175120 96 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm25642-201ENSMUST00000175137 66 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm43563-201ENSMUST00000196761 198 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Gm8031-201ENSMUST00000213430 626 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.19□□□□□ -1.9
Trim28Q62318 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim28Q62318 Gm23453-201ENSMUST00000083326 106 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms