Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm29661-201ENSMUST00000186781 315 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm29308-201ENSMUST00000188863 315 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm29167-201ENSMUST00000190024 377 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm28414-201ENSMUST00000190111 294 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm37089-201ENSMUST00000195616 129 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm34139-201ENSMUST00000196166 294 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.97□□□□□ -2.25
Trav3-3Q5R1C3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm22485-201ENSMUST00000157990 109 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm23016-201ENSMUST00000158431 62 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm22129-201ENSMUST00000179034 107 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Mir6406-201ENSMUST00000183592 120 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Mir7091-201ENSMUST00000184075 79 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm18433-201ENSMUST00000192747 197 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm37579-201ENSMUST00000194291 142 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trav3-3Q5R1C3 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm13341-201ENSMUST00000120780 672 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm23558-201ENSMUST00000157823 80 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm27313-201ENSMUST00000183500 142 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm45878-201ENSMUST00000211839 241 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Mir320-201ENSMUST00000083594 82 ntBASIC0.95□□□□□ -2.26
Trav3-3Q5R1C3 Gm14882-201ENSMUST00000117216 218 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm11386-201ENSMUST00000117761 347 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm3027-201ENSMUST00000167579 451 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm25958-201ENSMUST00000175114 71 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm25314-201ENSMUST00000178810 79 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm37128-201ENSMUST00000192599 232 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm25801-201ENSMUST00000082638 106 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Gm24494-201ENSMUST00000083804 81 ntBASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.94□□□□□ -2.26
Trav3-3Q5R1C3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm13729-201ENSMUST00000120328 406 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm14392-201ENSMUST00000120332 401 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm14413-201ENSMUST00000122158 408 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm11254-201ENSMUST00000122368 653 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm23435-201ENSMUST00000157183 156 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm22281-201ENSMUST00000157198 103 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm25707-201ENSMUST00000175120 96 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Mir3103-201ENSMUST00000175474 67 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm19855-201ENSMUST00000210145 249 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm24625-201ENSMUST00000082622 130 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Snord1a-201ENSMUST00000083160 74 ntBASIC0.93□□□□□ -2.26
Trav3-3Q5R1C3 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm26500-201ENSMUST00000101867 106 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm23950-201ENSMUST00000104026 129 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm22785-201ENSMUST00000104087 132 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm25485-201ENSMUST00000104120 132 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm22136-201ENSMUST00000158751 268 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm24308-201ENSMUST00000177773 114 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm43199-201ENSMUST00000200019 307 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm45402-201ENSMUST00000211796 223 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm22980-201ENSMUST00000082608 70 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm24035-201ENSMUST00000082867 107 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm23097-201ENSMUST00000083448 105 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
Trav3-3Q5R1C3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm22935-201ENSMUST00000103960 104 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm22656-201ENSMUST00000104199 171 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Mir1b-201ENSMUST00000117012 122 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm24394-201ENSMUST00000158141 123 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm28343-201ENSMUST00000185386 112 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm45150-201ENSMUST00000206051 467 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Gm45268-201ENSMUST00000210046 370 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms