Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm20102-201ENSMUST00000222445 220 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm12417-201ENSMUST00000119153 403 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm12433-201ENSMUST00000119659 255 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm11512-201ENSMUST00000119669 663 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24005-201ENSMUST00000158459 296 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24222-201ENSMUST00000158834 93 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23059-201ENSMUST00000158978 107 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm26430-201ENSMUST00000178054 107 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24390-201ENSMUST00000179578 62 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm27517-201ENSMUST00000184347 236 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm26265-202ENSMUST00000196326 133 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm44962-201ENSMUST00000206460 279 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm5899-201ENSMUST00000071770 270 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Snord118-201ENSMUST00000082965 135 ntBASIC1.3□□□□□ -2.2
Trav8d-2Q5R1B6 Gm22199-201ENSMUST00000122660 126 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm15899-201ENSMUST00000128586 238 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23169-201ENSMUST00000157157 112 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm9227-201ENSMUST00000194733 566 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm45402-201ENSMUST00000211796 223 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23731-201ENSMUST00000083749 107 ntBASIC1.29□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm6025-201ENSMUST00000121517 201 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm22315-201ENSMUST00000158010 143 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm25486-201ENSMUST00000158726 63 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm17100-201ENSMUST00000168963 272 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm44491-201ENSMUST00000196794 96 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm35736-201ENSMUST00000203681 313 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.28□□□□□ -2.2
Trav8d-2Q5R1B6 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm11606-201ENSMUST00000120706 617 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm14287-201ENSMUST00000121060 117 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm22963-201ENSMUST00000157960 91 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm23221-201ENSMUST00000158118 93 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Mir7063-201ENSMUST00000184158 91 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm28453-203ENSMUST00000187041 189 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm43035-201ENSMUST00000197626 517 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Snord68-201ENSMUST00000082516 86 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm25801-201ENSMUST00000082638 106 ntBASIC1.27□□□□□ -2.21
Trav8d-2Q5R1B6 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm11386-201ENSMUST00000117761 347 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Rnu7-201ENSMUST00000158458 62 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Mir3057-201ENSMUST00000175040 91 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm9156-201ENSMUST00000189660 463 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Snora3-201ENSMUST00000083082 132 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm23347-201ENSMUST00000083823 82 ntBASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Trav8d-2Q5R1B6 Gm26474-201ENSMUST00000116762 122 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm14803-201ENSMUST00000117163 361 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm11854-201ENSMUST00000117839 446 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm11254-201ENSMUST00000122368 653 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm23535-201ENSMUST00000157542 106 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm22555-201ENSMUST00000157801 62 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm43578-201ENSMUST00000201250 459 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.25□□□□□ -2.21
Trav8d-2Q5R1B6 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 240.8 ms