Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Mir7065-201ENSMUST00000185110 61 ntBASIC0.09□□□□□ -2.4
Pds5bQ4VA53 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.09□□□□□ -2.4
Pds5bQ4VA53 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Pds5bQ4VA53 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.09□□□□□ -2.4
Pds5bQ4VA53 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.09□□□□□ -2.4
Pds5bQ4VA53 Gm25802-201ENSMUST00000082639 77 ntBASIC0.09□□□□□ -2.4
Pds5bQ4VA53 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Pds5bQ4VA53 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm11859-201ENSMUST00000118099 455 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm22983-201ENSMUST00000158308 104 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm22942-201ENSMUST00000158563 124 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Mir466m-201ENSMUST00000175052 84 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm37727-201ENSMUST00000191637 819 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm43026-201ENSMUST00000202972 325 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm24615-201ENSMUST00000083268 113 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm24256-201ENSMUST00000083696 84 ntBASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.08□□□□□ -2.4
Pds5bQ4VA53 Gm24833-201ENSMUST00000116775 120 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 Gm17528-201ENSMUST00000171026 239 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 Mir3964-201ENSMUST00000174898 74 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.07□□□□□ -2.4
Pds5bQ4VA53 Gm15177-201ENSMUST00000120491 577 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm25805-201ENSMUST00000122788 108 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm22337-201ENSMUST00000157721 132 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm26487-201ENSMUST00000158022 94 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Mir6355-201ENSMUST00000183687 106 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm27715-201ENSMUST00000184714 260 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm38231-201ENSMUST00000192030 347 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm38208-201ENSMUST00000192476 114 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Snord49b-201ENSMUST00000082503 72 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm24977-201ENSMUST00000083106 163 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm22972-201ENSMUST00000083297 131 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Mir421-201ENSMUST00000083575 76 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.06□□□□□ -2.4
Pds5bQ4VA53 Gm26339-201ENSMUST00000102368 99 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Gm37923-201ENSMUST00000191624 161 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Gm44491-201ENSMUST00000196794 96 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Gm18971-201ENSMUST00000197240 374 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.05□□□□□ -2.4
Pds5bQ4VA53 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.05□□□□□ -2.4
Pds5bQ4VA53 Mir883a-201ENSMUST00000104824 76 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm14887-201ENSMUST00000119522 663 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm15266-201ENSMUST00000119635 255 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm23589-201ENSMUST00000157660 105 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm23641-201ENSMUST00000157857 101 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm25156-201ENSMUST00000179809 79 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm42958-201ENSMUST00000197595 318 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm43914-201ENSMUST00000203592 594 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm34783-201ENSMUST00000209159 303 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm45658-201ENSMUST00000209197 580 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Mir411-201ENSMUST00000083543 82 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm22193-201ENSMUST00000116868 76 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm12881-201ENSMUST00000121191 203 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm11849-201ENSMUST00000121293 261 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Mir6411-201ENSMUST00000183556 108 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm5116-201ENSMUST00000187732 463 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm6003-201ENSMUST00000187903 463 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm29627-201ENSMUST00000187984 463 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm29600-201ENSMUST00000188687 377 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm44554-201ENSMUST00000208738 147 ntBASIC0.04□□□□□ -2.4
Pds5bQ4VA53 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.04□□□□□ -2.4
Pds5bQ4VA53 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.03□□□□□ -2.4
Pds5bQ4VA53 Gm15010-201ENSMUST00000117153 407 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 Gm14551-201ENSMUST00000120802 256 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
Pds5bQ4VA53 Gm26263-201ENSMUST00000083281 164 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 Gm23733-201ENSMUST00000083750 106 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 Gm23848-201ENSMUST00000083826 106 ntBASIC0.03□□□□□ -2.41
Pds5bQ4VA53 Gm23058-201ENSMUST00000093703 107 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms