Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm24926-201ENSMUST00000178053 79 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm22632-201ENSMUST00000178266 79 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm26297-201ENSMUST00000179464 132 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm27793-201ENSMUST00000183405 76 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Mir6399-201ENSMUST00000184050 84 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm27648-201ENSMUST00000184315 107 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm26379-202ENSMUST00000200225 132 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm14448-201ENSMUST00000116383 210 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm22713-201ENSMUST00000116895 130 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm12351-201ENSMUST00000118727 292 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm25270-201ENSMUST00000122606 138 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm23716-201ENSMUST00000157348 144 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm26157-201ENSMUST00000158974 126 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm25020-201ENSMUST00000178071 107 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm10172-201ENSMUST00000085929 558 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.49□□□□□ -1.85
Col6a1Q04857 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a1Q04857 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a1Q04857 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a1Q04857 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a1Q04857 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a1Q04857 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm26135-201ENSMUST00000101993 72 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm24892-201ENSMUST00000122747 104 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Snord50b-201ENSMUST00000178497 72 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm27869-201ENSMUST00000184327 122 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Mir3068-202ENSMUST00000197755 79 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm44052-201ENSMUST00000203382 396 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm25136-201ENSMUST00000083253 115 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Gm23947-201ENSMUST00000093636 107 ntBASIC3.48□□□□□ -1.85
Col6a1Q04857 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a1Q04857 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25089-201ENSMUST00000102015 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23202-201ENSMUST00000104376 129 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm11356-201ENSMUST00000118974 192 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25707-201ENSMUST00000175120 96 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25840-201ENSMUST00000177821 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24952-201ENSMUST00000177909 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23682-201ENSMUST00000178146 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24652-201ENSMUST00000178223 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm22629-201ENSMUST00000178272 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24021-201ENSMUST00000178435 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm22274-201ENSMUST00000178441 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm22050-201ENSMUST00000178442 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23688-201ENSMUST00000178502 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23944-201ENSMUST00000178607 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm26283-201ENSMUST00000178625 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25452-201ENSMUST00000178776 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23286-201ENSMUST00000178963 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm22640-201ENSMUST00000179035 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25984-201ENSMUST00000179129 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25585-201ENSMUST00000179469 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm26374-201ENSMUST00000179737 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24040-201ENSMUST00000179786 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm25017-201ENSMUST00000179805 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm23618-201ENSMUST00000179912 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm26284-201ENSMUST00000180107 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24570-201ENSMUST00000180314 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24654-201ENSMUST00000180315 79 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm42739-201ENSMUST00000200687 226 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a1Q04857 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gm24625-201ENSMUST00000082622 130 ntBASIC3.47□□□□□ -1.85
Col6a1Q04857 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a1Q04857 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Col6a1Q04857 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm22003-201ENSMUST00000101885 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm24234-201ENSMUST00000104316 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm22483-201ENSMUST00000157986 274 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm25253-201ENSMUST00000179958 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm22756-201ENSMUST00000180118 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm37545-201ENSMUST00000186512 148 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm44526-201ENSMUST00000204664 121 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm45492-201ENSMUST00000211611 288 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm8508-201ENSMUST00000061226 363 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm26054-201ENSMUST00000083037 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm24492-201ENSMUST00000083798 107 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Gm22681-201ENSMUST00000083853 106 ntBASIC3.46□□□□□ -1.86
Col6a1Q04857 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Col6a1Q04857 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a1Q04857 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col6a1Q04857 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms