Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm25651-201ENSMUST00000083782 119 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm22656-201ENSMUST00000104199 171 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm14296-202ENSMUST00000108931 750 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Mir1904-201ENSMUST00000122702 80 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm25384-201ENSMUST00000157807 105 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm22485-201ENSMUST00000157990 109 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm19901-201ENSMUST00000192191 495 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm18546-201ENSMUST00000197245 676 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm43993-201ENSMUST00000203972 247 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm45402-201ENSMUST00000211796 223 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.95□□□□□ -2.26
Nkx3-1P97436 Gm8125-201ENSMUST00000216602 738 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Mir429-201ENSMUST00000083493 83 ntBASIC0.95□□□□□ -2.26
Nkx3-1P97436 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm25506-201ENSMUST00000104339 70 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm11386-201ENSMUST00000117761 347 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm12225-201ENSMUST00000117995 298 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm13475-201ENSMUST00000119290 234 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm12748-201ENSMUST00000120763 504 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm24630-201ENSMUST00000122768 106 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.94□□□□□ -2.26
Nkx3-1P97436 Mir1967-201ENSMUST00000157789 82 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm22537-201ENSMUST00000158172 199 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm23339-201ENSMUST00000158962 139 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm25956-201ENSMUST00000175115 217 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm22565-201ENSMUST00000175540 69 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm26335-201ENSMUST00000178449 107 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm27313-201ENSMUST00000183500 142 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm45207-201ENSMUST00000207469 145 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Nkx3-1P97436 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm25357-201ENSMUST00000082745 72 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Snord14a-201ENSMUST00000082807 87 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm26493-201ENSMUST00000083155 136 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Gm23097-201ENSMUST00000083448 105 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 Rny1-201ENSMUST00000083767 112 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.94□□□□□ -2.26
Nkx3-1P97436 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm24282-201ENSMUST00000104232 66 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm6829-201ENSMUST00000119858 360 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm6025-201ENSMUST00000121517 201 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm14972-201ENSMUST00000121780 364 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm22074-201ENSMUST00000158595 113 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm17148-201ENSMUST00000164702 249 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm24390-201ENSMUST00000179578 62 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm20257-202ENSMUST00000188643 130 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm28506-201ENSMUST00000189937 150 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm44655-201ENSMUST00000207768 423 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm45315-201ENSMUST00000209283 333 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.93□□□□□ -2.26
Nkx3-1P97436 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.93□□□□□ -2.26
Nkx3-1P97436 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm15861-201ENSMUST00000120979 339 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm26405-201ENSMUST00000158495 100 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Mir6381-201ENSMUST00000183426 87 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Nkx3-1P97436 Mir6985-201ENSMUST00000184641 61 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm27539-201ENSMUST00000184971 224 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm37128-201ENSMUST00000192599 232 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm18696-201ENSMUST00000220103 274 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Nkx3-1P97436 Snora34-201ENSMUST00000083402 138 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Gm25896-201ENSMUST00000083713 136 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.92□□□□□ -2.26
Nkx3-1P97436 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm26474-201ENSMUST00000116762 122 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm6956-201ENSMUST00000134724 546 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm24777-201ENSMUST00000157644 107 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Cfap61-214ENSMUST00000167179 183 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms