Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm9830-201ENSMUST00000178509 357 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.16□□□□□ -2.06
NcanP55066 Gm44024-201ENSMUST00000203008 476 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm24764-201ENSMUST00000083686 199 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm23041-201ENSMUST00000083868 106 ntBASIC2.16□□□□□ -2.06
NcanP55066 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.16□□□□□ -2.06
NcanP55066 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.16□□□□□ -2.06
NcanP55066 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NcanP55066 Gm23142-201ENSMUST00000101848 105 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm26240-201ENSMUST00000101893 105 ntBASIC2.15□□□□□ -2.07
NcanP55066 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NcanP55066 Gm14882-201ENSMUST00000117216 218 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm11862-201ENSMUST00000119678 659 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm14588-201ENSMUST00000119895 172 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm12304-201ENSMUST00000120312 385 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm23329-201ENSMUST00000157415 108 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm24847-201ENSMUST00000158032 108 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm23262-201ENSMUST00000158323 168 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm25956-201ENSMUST00000175115 217 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm25996-201ENSMUST00000175393 117 ntBASIC2.15□□□□□ -2.07
NcanP55066 Mir7079-201ENSMUST00000184697 69 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm29397-201ENSMUST00000185205 333 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.15□□□□□ -2.07
NcanP55066 Gm23679-201ENSMUST00000083161 119 ntBASIC2.15□□□□□ -2.07
NcanP55066 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.15□□□□□ -2.07
NcanP55066 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.15□□□□□ -2.07
NcanP55066 Mir496a-201ENSMUST00000093627 79 ntBASIC2.15□□□□□ -2.07
NcanP55066 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.15□□□□□ -2.07
NcanP55066 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
NcanP55066 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.14□□□□□ -2.07
NcanP55066 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NcanP55066 Gm12646-201ENSMUST00000119144 238 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm2830-201ENSMUST00000140330 385 ntBASIC2.14□□□□□ -2.07
NcanP55066 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NcanP55066 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.14□□□□□ -2.07
NcanP55066 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.14□□□□□ -2.07
NcanP55066 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm28058-201ENSMUST00000186421 264 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm19118-201ENSMUST00000222554 98 ntBASIC2.14□□□□□ -2.07
NcanP55066 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm26314-201ENSMUST00000083891 107 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm26107-201ENSMUST00000083972 107 ntBASIC2.14□□□□□ -2.07
NcanP55066 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.14□□□□□ -2.07
NcanP55066 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.13□□□□□ -2.07
NcanP55066 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NcanP55066 Gm26154-201ENSMUST00000102339 96 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm14919-201ENSMUST00000120839 390 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm24478-201ENSMUST00000157439 158 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm23589-201ENSMUST00000157660 105 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm22340-201ENSMUST00000157717 114 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm26468-201ENSMUST00000158644 106 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm24154-201ENSMUST00000175261 130 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm24304-201ENSMUST00000177635 107 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm24388-201ENSMUST00000177872 107 ntBASIC2.13□□□□□ -2.07
NcanP55066 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
NcanP55066 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NcanP55066 Gm28995-201ENSMUST00000186625 261 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm44419-201ENSMUST00000203338 229 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.13□□□□□ -2.07
NcanP55066 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.13□□□□□ -2.07
NcanP55066 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.13□□□□□ -2.07
NcanP55066 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.13□□□□□ -2.07
NcanP55066 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NcanP55066 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NcanP55066 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.13□□□□□ -2.07
NcanP55066 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NcanP55066 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.12□□□□□ -2.07
NcanP55066 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NcanP55066 Gm22195-201ENSMUST00000116861 108 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm13913-201ENSMUST00000121126 260 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm24385-201ENSMUST00000122694 350 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.12□□□□□ -2.07
NcanP55066 Gm22316-201ENSMUST00000158012 216 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm25457-201ENSMUST00000179509 107 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm20923-201ENSMUST00000190009 319 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm21088-201ENSMUST00000190875 316 ntBASIC2.12□□□□□ -2.07
NcanP55066 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.12□□□□□ -2.07
NcanP55066 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NcanP55066 Gm23406-201ENSMUST00000082537 122 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm24624-201ENSMUST00000082617 164 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm24661-201ENSMUST00000083205 104 ntBASIC2.12□□□□□ -2.07
NcanP55066 Gm23462-201ENSMUST00000083264 104 ntBASIC2.12□□□□□ -2.07
NcanP55066 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.12□□□□□ -2.07
NcanP55066 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NcanP55066 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NcanP55066 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NcanP55066 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NcanP55066 Mir669g-201ENSMUST00000116809 123 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm14774-201ENSMUST00000117857 536 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm13729-201ENSMUST00000120328 406 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm12785-201ENSMUST00000122052 172 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm26280-201ENSMUST00000157096 101 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm25625-201ENSMUST00000157221 96 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm16326-201ENSMUST00000162843 414 ntBASIC2.11□□□□□ -2.07
NcanP55066 Mir5624-201ENSMUST00000176635 61 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm24487-201ENSMUST00000178017 63 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm27753-201ENSMUST00000184742 203 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm37338-201ENSMUST00000191986 127 ntBASIC2.11□□□□□ -2.07
NcanP55066 Gm44010-201ENSMUST00000204432 331 ntBASIC2.11□□□□□ -2.07
NcanP55066 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms