Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd9P28357 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd9P28357 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Hoxd9P28357 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxd9P28357 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxd9P28357 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.4□□□□□ -1.86
Hoxd9P28357 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.4□□□□□ -1.86
Hoxd9P28357 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hoxd9P28357 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hoxd9P28357 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm44489-201ENSMUST00000104619 97 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm24595-201ENSMUST00000122501 110 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm25825-201ENSMUST00000157091 124 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm23602-201ENSMUST00000157258 132 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm22382-201ENSMUST00000158185 130 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm22890-201ENSMUST00000158642 144 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm27792-201ENSMUST00000184031 115 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm11351-202ENSMUST00000225724 478 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Mir137-201ENSMUST00000083635 73 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Hoxd9P28357 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.4□□□□□ -1.87
Hoxd9P28357 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hoxd9P28357 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Hoxd9P28357 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd9P28357 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Hoxd9P28357 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm14567-201ENSMUST00000117155 174 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm14602-201ENSMUST00000118625 340 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm14568-201ENSMUST00000119321 294 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm15365-201ENSMUST00000122392 300 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm24056-201ENSMUST00000158617 146 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm24553-201ENSMUST00000158653 131 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Mir7039-201ENSMUST00000183852 85 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm5829-201ENSMUST00000191383 351 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm37698-201ENSMUST00000192605 463 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm45245-201ENSMUST00000210082 376 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Hoxd9P28357 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.39□□□□□ -1.87
Hoxd9P28357 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Hoxd9P28357 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd9P28357 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd9P28357 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm24127-201ENSMUST00000104110 130 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm25727-201ENSMUST00000104522 131 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm25323-201ENSMUST00000122555 103 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm28912-201ENSMUST00000189001 234 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm44355-201ENSMUST00000200417 104 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm26493-201ENSMUST00000083155 136 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm23727-201ENSMUST00000083352 164 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Mir7-1-201ENSMUST00000083500 108 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.38□□□□□ -1.87
Hoxd9P28357 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd9P28357 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd9P28357 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Hoxd9P28357 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd9P28357 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Hoxd9P28357 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm23257-201ENSMUST00000158322 132 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm24811-201ENSMUST00000175313 100 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Mir28b-201ENSMUST00000175399 80 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd9P28357 Gm19620-201ENSMUST00000195972 434 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.37□□□□□ -1.87
Hoxd9P28357 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Snora7a-201ENSMUST00000082629 140 ntBASIC3.37□□□□□ -1.87
Hoxd9P28357 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd9P28357 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm25091-201ENSMUST00000103997 71 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm24468-201ENSMUST00000104489 104 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm11285-201ENSMUST00000118443 322 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm22228-201ENSMUST00000157364 101 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm23253-201ENSMUST00000157441 104 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm25438-201ENSMUST00000158281 110 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm24946-201ENSMUST00000158332 106 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm25978-201ENSMUST00000158698 90 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms