Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23435-201ENSMUST00000157183 156 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Mir1967-201ENSMUST00000157789 82 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm22944-201ENSMUST00000158662 133 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm24308-201ENSMUST00000177773 114 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm28414-201ENSMUST00000190111 294 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm37162-201ENSMUST00000191708 551 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.09□□□□□ -2.23
Sdc1P18828 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.09□□□□□ -2.23
Sdc1P18828 Gm20102-201ENSMUST00000222445 220 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Sdc1P18828 Mir293-201ENSMUST00000104841 80 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm13439-201ENSMUST00000117541 409 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm11386-201ENSMUST00000117761 347 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm3027-201ENSMUST00000167579 451 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Mir7679-201ENSMUST00000183379 63 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm27493-201ENSMUST00000184128 78 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Mir7226-201ENSMUST00000184953 60 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Sdc1P18828 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Sdc1P18828 Gm34139-201ENSMUST00000196166 294 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm43723-201ENSMUST00000196886 189 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Gm42774-201ENSMUST00000198854 283 ntBASIC1.08□□□□□ -2.24
Sdc1P18828 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Sdc1P18828 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Sdc1P18828 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Sdc1P18828 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Sdc1P18828 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Sdc1P18828 Gm11522-201ENSMUST00000120533 176 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm13396-201ENSMUST00000120617 271 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm15899-201ENSMUST00000128586 238 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm22281-201ENSMUST00000157198 103 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm26038-201ENSMUST00000158151 106 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm22074-201ENSMUST00000158595 113 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm27793-201ENSMUST00000183405 76 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Mir6352-201ENSMUST00000184495 116 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm37089-201ENSMUST00000195616 129 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Sdc1P18828 Gm22723-201ENSMUST00000083820 129 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Gm23041-201ENSMUST00000083868 106 ntBASIC1.07□□□□□ -2.24
Sdc1P18828 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Sdc1P18828 Gm23109-201ENSMUST00000116867 126 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm12225-201ENSMUST00000117995 298 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm22803-201ENSMUST00000158049 283 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.06□□□□□ -2.24
Sdc1P18828 Gm27271-201ENSMUST00000183509 170 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm28257-201ENSMUST00000185244 463 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm18433-201ENSMUST00000192747 197 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm9227-201ENSMUST00000194733 566 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm36953-201ENSMUST00000195295 268 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm19855-201ENSMUST00000210145 249 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm45878-201ENSMUST00000211839 241 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Sdc1P18828 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Sdc1P18828 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.06□□□□□ -2.24
Sdc1P18828 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm22073-201ENSMUST00000122668 189 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.05□□□□□ -2.24
Sdc1P18828 Gm23277-201ENSMUST00000157914 136 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Mir669n-201ENSMUST00000158636 54 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm26363-201ENSMUST00000158866 83 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.05□□□□□ -2.24
Sdc1P18828 Gm24618-201ENSMUST00000177718 94 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm23953-201ENSMUST00000178214 94 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm26332-201ENSMUST00000179813 94 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm22863-201ENSMUST00000180265 94 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.05□□□□□ -2.24
Sdc1P18828 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Sdc1P18828 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Snord1a-201ENSMUST00000083160 74 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Mir148b-201ENSMUST00000083626 97 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Gm24494-201ENSMUST00000083804 81 ntBASIC1.05□□□□□ -2.24
Sdc1P18828 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Sdc1P18828 Mir758-201ENSMUST00000103260 81 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm22935-201ENSMUST00000103960 104 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm22656-201ENSMUST00000104199 171 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Mir1b-201ENSMUST00000117012 122 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm12449-201ENSMUST00000117572 234 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm22485-201ENSMUST00000157990 109 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm24799-201ENSMUST00000178431 79 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm22129-201ENSMUST00000179034 107 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Sdc1P18828 Mir6346-201ENSMUST00000183982 81 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm37918-201ENSMUST00000192071 120 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm43512-201ENSMUST00000198495 176 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm44010-201ENSMUST00000204432 331 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.04□□□□□ -2.24
Sdc1P18828 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Gm11351-202ENSMUST00000225724 478 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms