Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm25170-201ENSMUST00000104191 129 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm23336-201ENSMUST00000117023 123 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm13396-201ENSMUST00000120617 271 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm25102-201ENSMUST00000122479 112 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm26363-201ENSMUST00000158866 83 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm24315-201ENSMUST00000177835 127 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm9830-201ENSMUST00000178509 357 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Cdx1P18111 Mir7059-201ENSMUST00000184825 59 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm37089-201ENSMUST00000195616 129 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm5899-201ENSMUST00000071770 270 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cdx1P18111 Gm24494-201ENSMUST00000083804 81 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.06□□□□□ -2.24
Cdx1P18111 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm23329-201ENSMUST00000157415 108 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm24154-201ENSMUST00000175261 130 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm26501-201ENSMUST00000178307 107 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm26457-201ENSMUST00000082678 78 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm25128-201ENSMUST00000083339 76 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.05□□□□□ -2.24
Cdx1P18111 Mir343-201ENSMUST00000102360 75 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Mir743b-201ENSMUST00000104751 77 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm26249-201ENSMUST00000116708 118 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Cdx1P18111 Gm25976-201ENSMUST00000158695 130 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 Mir3098-201ENSMUST00000175416 87 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.04□□□□□ -2.24
Cdx1P18111 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm35736-201ENSMUST00000203681 313 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.04□□□□□ -2.24
Cdx1P18111 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Mir448-201ENSMUST00000083516 112 ntBASIC1.04□□□□□ -2.24
Cdx1P18111 Gm25414-201ENSMUST00000101814 107 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm26301-201ENSMUST00000104813 95 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Cdx1P18111 Gm11389-201ENSMUST00000121407 430 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.03□□□□□ -2.24
Cdx1P18111 Gm24726-201ENSMUST00000158232 121 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm26213-201ENSMUST00000158582 110 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm22308-201ENSMUST00000177609 107 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm27755-201ENSMUST00000184623 132 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm27385-201ENSMUST00000184747 104 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm8151-201ENSMUST00000184817 871 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Mir7052-201ENSMUST00000184821 65 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm20118-201ENSMUST00000187207 162 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.03□□□□□ -2.24
Cdx1P18111 Gm13153-201ENSMUST00000120969 637 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm23212-201ENSMUST00000122718 60 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm22485-201ENSMUST00000157990 109 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.02□□□□□ -2.25
Cdx1P18111 Gm22929-201ENSMUST00000175517 107 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm23419-201ENSMUST00000175523 84 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm23523-201ENSMUST00000180190 107 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Cdx1P18111 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
Cdx1P18111 Gm37693-201ENSMUST00000194562 234 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.02□□□□□ -2.25
Cdx1P18111 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.02□□□□□ -2.25
Cdx1P18111 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Cdx1P18111 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.02□□□□□ -2.25
Cdx1P18111 Gm11862-201ENSMUST00000119678 659 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm13341-201ENSMUST00000120780 672 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm25052-201ENSMUST00000122661 158 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Cdx1P18111 Gm22233-201ENSMUST00000157464 114 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm24191-201ENSMUST00000157977 122 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm25868-201ENSMUST00000158253 114 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm24221-201ENSMUST00000158833 313 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm24510-201ENSMUST00000174965 94 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Mir200b-201ENSMUST00000083615 70 ntBASIC1.01□□□□□ -2.25
Cdx1P18111 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Cdx1P18111 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cdx1P18111 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1□□□□□ -2.25
Cdx1P18111 Gm24777-201ENSMUST00000157644 107 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm22166-201ENSMUST00000178419 121 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm23288-201ENSMUST00000179213 121 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm25121-201ENSMUST00000179846 79 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm28648-201ENSMUST00000190092 343 ntBASIC1□□□□□ -2.25
Cdx1P18111 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1□□□□□ -2.25
Cdx1P18111 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1□□□□□ -2.25
Cdx1P18111 AC130821.1-201ENSMUST00000221997 293 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm46997-201ENSMUST00000222108 217 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm24624-201ENSMUST00000082617 164 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm25357-201ENSMUST00000082745 72 ntBASIC1□□□□□ -2.25
Cdx1P18111 Gm24035-201ENSMUST00000082867 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms