Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm22038-201ENSMUST00000157277 242 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm23589-201ENSMUST00000157660 105 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm15914-201ENSMUST00000161922 309 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Mir5104-201ENSMUST00000175319 94 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm28666-201ENSMUST00000186649 274 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm43898-201ENSMUST00000204456 424 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm17911-201ENSMUST00000210806 877 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.27□□□□□ -2.37
Col1a1P11087 Gm8858-201ENSMUST00000118259 342 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm12016-201ENSMUST00000119079 681 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm22337-201ENSMUST00000157721 132 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm26484-201ENSMUST00000158018 106 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm25873-201ENSMUST00000180317 107 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm27717-201ENSMUST00000183933 151 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Mir6382-201ENSMUST00000184055 110 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm43529-201ENSMUST00000199178 412 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm24977-201ENSMUST00000083106 163 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Mir33-201ENSMUST00000083531 69 ntBASIC0.26□□□□□ -2.37
Col1a1P11087 Gm15010-201ENSMUST00000117153 407 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Gm24784-201ENSMUST00000157640 62 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Gm22403-201ENSMUST00000174919 84 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.25□□□□□ -2.37
Col1a1P11087 Gm18971-201ENSMUST00000197240 374 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Gm43004-201ENSMUST00000201872 703 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Gm46136-201ENSMUST00000214730 565 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Col1a1P11087 Gm24311-201ENSMUST00000082570 104 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Gm22972-201ENSMUST00000083297 131 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.25□□□□□ -2.37
Col1a1P11087 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
Col1a1P11087 Gm15266-201ENSMUST00000119635 255 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm25805-201ENSMUST00000122788 108 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm25294-201ENSMUST00000122791 104 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm23331-201ENSMUST00000157423 108 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm2962-201ENSMUST00000159266 336 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm37923-201ENSMUST00000191624 161 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm43602-201ENSMUST00000196772 300 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm44396-201ENSMUST00000199843 114 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Col1a1P11087 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm24615-201ENSMUST00000083268 113 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Col1a1P11087 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Col1a1P11087 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.24□□□□□ -2.37
Col1a1P11087 Mir687-201ENSMUST00000102166 89 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm24271-201ENSMUST00000102327 111 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm22796-201ENSMUST00000157234 106 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm23641-201ENSMUST00000157857 101 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm42958-201ENSMUST00000197595 318 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm44449-201ENSMUST00000203610 153 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm5010-201ENSMUST00000213131 260 ntBASIC0.23□□□□□ -2.37
Col1a1P11087 Gm26377-201ENSMUST00000102184 108 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Mir374b-201ENSMUST00000102314 95 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm11792-201ENSMUST00000120640 168 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm2020-201ENSMUST00000145242 579 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm22817-201ENSMUST00000157448 356 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm23078-201ENSMUST00000157848 148 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col1a1P11087 Gm28435-201ENSMUST00000185496 108 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm37869-201ENSMUST00000193385 595 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm19032-201ENSMUST00000208584 592 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm7495-201ENSMUST00000215099 426 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.22□□□□□ -2.37
Col1a1P11087 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col1a1P11087 Gm22810-201ENSMUST00000082741 158 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm25650-201ENSMUST00000083784 162 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm25313-201ENSMUST00000101817 116 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm12102-201ENSMUST00000118251 604 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm12105-201ENSMUST00000120846 779 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm23184-201ENSMUST00000122594 131 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm23068-201ENSMUST00000158239 293 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm25596-201ENSMUST00000178368 107 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm25361-201ENSMUST00000179358 76 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm23287-201ENSMUST00000179427 116 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm23143-201ENSMUST00000180137 116 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Col1a1P11087 Gm26914-201ENSMUST00000182262 223 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm27421-201ENSMUST00000184729 167 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm37713-201ENSMUST00000191746 198 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm44491-201ENSMUST00000196794 96 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Gm44976-201ENSMUST00000205543 261 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col1a1P11087 Gm24871-201ENSMUST00000083099 116 ntBASIC0.22□□□□□ -2.37
Col1a1P11087 Rnu5g-201ENSMUST00000093721 116 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms