Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm20718-201ENSMUST00000176058 259 ntBASIC2.6□□□□□ -1.99
Best1O88870 Gm7958-201ENSMUST00000178255 468 ntBASIC2.6□□□□□ -1.99
Best1O88870 Gm7950-201ENSMUST00000179633 468 ntBASIC2.6□□□□□ -1.99
Best1O88870 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.6□□□□□ -1.99
Best1O88870 Gm28992-201ENSMUST00000190534 139 ntBASIC2.6□□□□□ -1.99
Best1O88870 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Best1O88870 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.6□□□□□ -1.99
Best1O88870 Gm45445-201ENSMUST00000209586 232 ntBASIC2.6□□□□□ -1.99
Best1O88870 Gm45452-201ENSMUST00000210905 177 ntBASIC2.6□□□□□ -1.99
Best1O88870 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.6□□□□□ -1.99
Best1O88870 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.6□□□□□ -1.99
Best1O88870 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.6□□□□□ -1.99
Best1O88870 Gm24044-201ENSMUST00000083107 156 ntBASIC2.6□□□□□ -1.99
Best1O88870 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.6□□□□□ -1.99
Best1O88870 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Best1O88870 Mir466k-201ENSMUST00000116774 122 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm26156-201ENSMUST00000116999 123 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm12512-201ENSMUST00000119620 217 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm14792-201ENSMUST00000119725 258 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.59□□□□□ -1.99
Best1O88870 Gm25863-201ENSMUST00000158249 329 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm25491-201ENSMUST00000158733 308 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm17052-201ENSMUST00000165496 289 ntBASIC2.59□□□□□ -1.99
Best1O88870 Snord53-201ENSMUST00000175146 78 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm44966-201ENSMUST00000208096 157 ntBASIC2.59□□□□□ -1.99
Best1O88870 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Best1O88870 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.59□□□□□ -2
Best1O88870 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Best1O88870 Gm26135-201ENSMUST00000101993 72 ntBASIC2.58□□□□□ -2
Best1O88870 Gm25808-201ENSMUST00000122784 284 ntBASIC2.58□□□□□ -2
Best1O88870 Gm26277-201ENSMUST00000157097 152 ntBASIC2.58□□□□□ -2
Best1O88870 Gm24922-201ENSMUST00000158511 102 ntBASIC2.58□□□□□ -2
Best1O88870 Gm25718-201ENSMUST00000158632 118 ntBASIC2.58□□□□□ -2
Best1O88870 Snord50b-201ENSMUST00000178497 72 ntBASIC2.58□□□□□ -2
Best1O88870 Gm44409-201ENSMUST00000198810 166 ntBASIC2.58□□□□□ -2
Best1O88870 Gm18346-201ENSMUST00000216782 325 ntBASIC2.58□□□□□ -2
Best1O88870 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.58□□□□□ -2
Best1O88870 Gm24536-201ENSMUST00000083144 107 ntBASIC2.58□□□□□ -2
Best1O88870 Gm26493-201ENSMUST00000083155 136 ntBASIC2.58□□□□□ -2
Best1O88870 Gm23264-201ENSMUST00000083372 107 ntBASIC2.58□□□□□ -2
Best1O88870 Gm22154-201ENSMUST00000083844 131 ntBASIC2.58□□□□□ -2
Best1O88870 Mir682-201ENSMUST00000102281 96 ntBASIC2.57□□□□□ -2
Best1O88870 Gm22782-201ENSMUST00000104082 132 ntBASIC2.57□□□□□ -2
Best1O88870 Gm22883-201ENSMUST00000157376 106 ntBASIC2.57□□□□□ -2
Best1O88870 Gm23640-201ENSMUST00000157860 104 ntBASIC2.57□□□□□ -2
Best1O88870 Gm22768-201ENSMUST00000158366 153 ntBASIC2.57□□□□□ -2
Best1O88870 Mir3086-201ENSMUST00000175072 87 ntBASIC2.57□□□□□ -2
Best1O88870 Mir6375-201ENSMUST00000197176 95 ntBASIC2.57□□□□□ -2
Best1O88870 Snord43-201ENSMUST00000199549 108 ntBASIC2.57□□□□□ -2
Best1O88870 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.57□□□□□ -2
Best1O88870 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.57□□□□□ -2
Best1O88870 Gm10092-201ENSMUST00000077110 180 ntBASIC2.57□□□□□ -2
Best1O88870 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.57□□□□□ -2
Best1O88870 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Best1O88870 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.56□□□□□ -2
Best1O88870 Gm26247-201ENSMUST00000116702 91 ntBASIC2.56□□□□□ -2
Best1O88870 Mir8103-201ENSMUST00000183945 107 ntBASIC2.56□□□□□ -2
Best1O88870 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.56□□□□□ -2
Best1O88870 Gm22622-201ENSMUST00000082870 129 ntBASIC2.56□□□□□ -2
Best1O88870 Snord118-201ENSMUST00000082965 135 ntBASIC2.56□□□□□ -2
Best1O88870 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Best1O88870 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Best1O88870 Gm23492-201ENSMUST00000116837 115 ntBASIC2.55□□□□□ -2
Best1O88870 Gm11936-201ENSMUST00000118323 160 ntBASIC2.55□□□□□ -2
Best1O88870 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.55□□□□□ -2
Best1O88870 Gm23409-201ENSMUST00000158516 237 ntBASIC2.55□□□□□ -2
Best1O88870 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.55□□□□□ -2
Best1O88870 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.55□□□□□ -2
Best1O88870 Gm22571-201ENSMUST00000082984 70 ntBASIC2.55□□□□□ -2
Best1O88870 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Best1O88870 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Best1O88870 Gm24122-201ENSMUST00000104107 132 ntBASIC2.54□□□□□ -2
Best1O88870 Gm14588-201ENSMUST00000119895 172 ntBASIC2.54□□□□□ -2
Best1O88870 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.54□□□□□ -2
Best1O88870 Gm24333-201ENSMUST00000175101 84 ntBASIC2.54□□□□□ -2
Best1O88870 Gm24816-201ENSMUST00000175311 151 ntBASIC2.54□□□□□ -2
Best1O88870 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.54□□□□□ -2
Best1O88870 Gm44491-201ENSMUST00000196794 96 ntBASIC2.54□□□□□ -2
Best1O88870 Gm25930-201ENSMUST00000082785 107 ntBASIC2.54□□□□□ -2
Best1O88870 Gm24698-201ENSMUST00000083883 130 ntBASIC2.54□□□□□ -2
Best1O88870 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.53□□□□□ -2
Best1O88870 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Best1O88870 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.53□□□□□ -2
Best1O88870 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.53□□□□□ -2
Best1O88870 Gm24423-201ENSMUST00000101982 106 ntBASIC2.53□□□□□ -2
Best1O88870 Gm24068-201ENSMUST00000104513 132 ntBASIC2.53□□□□□ -2
Best1O88870 Gm6574-201ENSMUST00000120037 362 ntBASIC2.53□□□□□ -2
Best1O88870 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.53□□□□□ -2
Best1O88870 Gm26411-201ENSMUST00000157668 107 ntBASIC2.53□□□□□ -2
Best1O88870 Rnu7-201ENSMUST00000158458 62 ntBASIC2.53□□□□□ -2
Best1O88870 Gm25368-201ENSMUST00000158847 131 ntBASIC2.53□□□□□ -2
Best1O88870 Gm26287-201ENSMUST00000158887 81 ntBASIC2.53□□□□□ -2
Best1O88870 Gm16162-201ENSMUST00000162296 297 ntBASIC2.53□□□□□ -2
Best1O88870 Gm17161-201ENSMUST00000169187 524 ntBASIC2.53□□□□□ -2
Best1O88870 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.53□□□□□ -2
Best1O88870 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.53□□□□□ -2
Best1O88870 Gm22951-201ENSMUST00000179471 107 ntBASIC2.53□□□□□ -2
Best1O88870 Gm9156-201ENSMUST00000189660 463 ntBASIC2.53□□□□□ -2
Best1O88870 Gm28921-201ENSMUST00000190219 378 ntBASIC2.53□□□□□ -2
Best1O88870 Gm25813-201ENSMUST00000082748 191 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms