Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm29229-201ENSMUST00000188874 323 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 Gm28288-201ENSMUST00000191019 214 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 Gm44564-201ENSMUST00000207985 180 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.52□□□□□ -2.17
Cldn1O88551 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 Mir148b-201ENSMUST00000083626 97 ntBASIC1.52□□□□□ -2.17
Cldn1O88551 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Cldn1O88551 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cldn1O88551 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Cldn1O88551 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cldn1O88551 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cldn1O88551 Gm26082-201ENSMUST00000104070 127 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm22673-201ENSMUST00000104415 131 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm14803-201ENSMUST00000117163 361 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm14882-201ENSMUST00000117216 218 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm25982-201ENSMUST00000157920 101 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm22085-201ENSMUST00000158344 110 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Mir3968-201ENSMUST00000175355 100 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
Cldn1O88551 Gm24618-201ENSMUST00000177718 94 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm23953-201ENSMUST00000178214 94 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm26332-201ENSMUST00000179813 94 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm22263-201ENSMUST00000180060 104 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm22863-201ENSMUST00000180265 94 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Mir7665-201ENSMUST00000184907 63 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm28257-201ENSMUST00000185244 463 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm44010-201ENSMUST00000204432 331 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Snord42a-201ENSMUST00000082606 65 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm24165-201ENSMUST00000082718 128 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Gm24977-201ENSMUST00000083106 163 ntBASIC1.51□□□□□ -2.17
Cldn1O88551 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Cldn1O88551 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Cldn1O88551 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cldn1O88551 Mir872-201ENSMUST00000104728 81 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm12351-201ENSMUST00000118727 292 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm25279-201ENSMUST00000122608 133 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cldn1O88551 Gm8121-201ENSMUST00000153583 499 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm22228-201ENSMUST00000157364 101 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Mir3086-201ENSMUST00000175072 87 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm28995-201ENSMUST00000186625 261 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm43884-201ENSMUST00000204251 559 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm25135-201ENSMUST00000082648 143 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Gm22685-201ENSMUST00000082848 106 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Mir340-201ENSMUST00000083483 98 ntBASIC1.5□□□□□ -2.17
Cldn1O88551 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cldn1O88551 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cldn1O88551 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Cldn1O88551 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cldn1O88551 Gm26500-201ENSMUST00000101867 106 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm24275-201ENSMUST00000116780 146 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm23172-201ENSMUST00000157160 124 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm22598-201ENSMUST00000157600 127 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm22338-201ENSMUST00000157715 129 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm24333-201ENSMUST00000175101 84 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm24799-201ENSMUST00000178431 79 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm27894-201ENSMUST00000184177 92 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm18433-201ENSMUST00000192747 197 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm26265-202ENSMUST00000196326 133 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cldn1O88551 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cldn1O88551 Gm22972-201ENSMUST00000083297 131 ntBASIC1.49□□□□□ -2.17
Cldn1O88551 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm22193-201ENSMUST00000116868 76 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm22843-201ENSMUST00000157710 134 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm22447-201ENSMUST00000158155 92 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm23858-201ENSMUST00000158384 106 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm23024-201ENSMUST00000158770 292 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm24737-201ENSMUST00000158861 100 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm26400-201ENSMUST00000175012 85 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.48□□□□□ -2.17
Cldn1O88551 Gm29005-201ENSMUST00000186773 320 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm20257-202ENSMUST00000188643 130 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cldn1O88551 Gm43583-201ENSMUST00000199235 303 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm43578-201ENSMUST00000201250 459 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Cldn1O88551 Gm44655-201ENSMUST00000207768 423 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm24152-201ENSMUST00000082764 163 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 Gm26329-201ENSMUST00000093723 110 ntBASIC1.48□□□□□ -2.17
Cldn1O88551 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 153.5 ms