Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm25715-201ENSMUST00000158627 125 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26400-201ENSMUST00000175012 85 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25956-201ENSMUST00000175115 217 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26502-201ENSMUST00000177732 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25350-201ENSMUST00000177849 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23446-201ENSMUST00000177977 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26201-201ENSMUST00000178047 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm24711-201ENSMUST00000178062 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm24609-201ENSMUST00000178166 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23265-201ENSMUST00000178321 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm22812-201ENSMUST00000178329 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26246-201ENSMUST00000178388 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25155-201ENSMUST00000178450 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm24760-201ENSMUST00000178530 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm22285-201ENSMUST00000178576 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm22417-201ENSMUST00000178656 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26270-201ENSMUST00000178690 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23313-201ENSMUST00000178931 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23089-201ENSMUST00000178947 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm24153-201ENSMUST00000179280 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25597-201ENSMUST00000179388 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25816-201ENSMUST00000179764 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26188-201ENSMUST00000179963 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26433-201ENSMUST00000180227 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm22128-201ENSMUST00000180346 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Mir7227-201ENSMUST00000200408 59 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm44473-201ENSMUST00000204039 152 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.23□□□□□ -2.21
Col5a1O88207 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23451-201ENSMUST00000083328 122 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm23727-201ENSMUST00000083352 164 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26166-201ENSMUST00000083788 107 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col5a1O88207 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col5a1O88207 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col5a1O88207 Gm22151-201ENSMUST00000116963 58 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm14001-201ENSMUST00000118847 247 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Mir1898-201ENSMUST00000122643 83 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.22□□□□□ -2.21
Col5a1O88207 Gm26102-201ENSMUST00000157251 284 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm22603-201ENSMUST00000157603 96 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm23008-201ENSMUST00000158946 80 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col5a1O88207 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col5a1O88207 Gm20923-201ENSMUST00000190009 319 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm21088-201ENSMUST00000190875 316 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm44858-201ENSMUST00000207360 154 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm45268-201ENSMUST00000210046 370 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm45313-201ENSMUST00000210584 178 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm26107-201ENSMUST00000083972 107 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm22195-201ENSMUST00000116861 108 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm26156-201ENSMUST00000116999 123 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm15211-201ENSMUST00000118932 528 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm12647-201ENSMUST00000118977 265 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm11572-201ENSMUST00000119164 120 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm13903-201ENSMUST00000120945 193 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm25325-201ENSMUST00000122559 86 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm26149-201ENSMUST00000157432 108 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm24191-201ENSMUST00000157977 122 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm24847-201ENSMUST00000158032 108 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm23003-201ENSMUST00000179948 107 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29512-201ENSMUST00000185544 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28110-201ENSMUST00000185782 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29057-201ENSMUST00000186468 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29661-201ENSMUST00000186781 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28737-201ENSMUST00000186808 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29118-201ENSMUST00000186908 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28433-201ENSMUST00000187085 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28759-201ENSMUST00000187621 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28831-201ENSMUST00000187739 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28752-201ENSMUST00000188340 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28569-201ENSMUST00000188748 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28120-201ENSMUST00000188812 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28369-201ENSMUST00000188993 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29037-201ENSMUST00000189092 313 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm28861-201ENSMUST00000189681 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29180-201ENSMUST00000190003 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm29575-201ENSMUST00000190597 315 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms