Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Mir466h-201ENSMUST00000104748 81 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm24598-201ENSMUST00000122510 74 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm22322-201ENSMUST00000157151 111 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm23545-201ENSMUST00000158205 104 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm25015-201ENSMUST00000158400 128 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm25711-201ENSMUST00000158633 128 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm17113-201ENSMUST00000170118 171 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Rpl35aO55142 Snord50b-201ENSMUST00000178497 72 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm26435-201ENSMUST00000179026 107 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm24350-202ENSMUST00000198309 132 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm43264-201ENSMUST00000202284 325 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm10025-201ENSMUST00000079568 372 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm24457-201ENSMUST00000083196 105 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Mir184-201ENSMUST00000083662 69 ntBASIC2.15□□□□□ -2.07
Rpl35aO55142 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.15□□□□□ -2.07
Rpl35aO55142 Gm11204-201ENSMUST00000122438 147 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm25945-201ENSMUST00000122484 135 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm24627-201ENSMUST00000122764 138 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm22535-201ENSMUST00000158174 119 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm22416-201ENSMUST00000158590 88 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm25119-201ENSMUST00000158815 88 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm27803-201ENSMUST00000183763 119 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm44256-201ENSMUST00000203304 335 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm22249-201ENSMUST00000082485 136 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Snora19-201ENSMUST00000082962 132 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm23658-201ENSMUST00000083233 132 ntBASIC2.14□□□□□ -2.07
Rpl35aO55142 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Rpl35aO55142 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Rpl35aO55142 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Rpl35aO55142 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm23015-201ENSMUST00000104145 128 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Snord19-201ENSMUST00000104609 76 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm25783-201ENSMUST00000122525 190 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm26279-201ENSMUST00000157095 102 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm22221-201ENSMUST00000157362 103 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Mir1967-201ENSMUST00000157789 82 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm25373-201ENSMUST00000158156 115 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm28282-201ENSMUST00000186072 186 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm2077-201ENSMUST00000195017 319 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm44393-201ENSMUST00000197418 138 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.13□□□□□ -2.07
Rpl35aO55142 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.13□□□□□ -2.07
Rpl35aO55142 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm22248-201ENSMUST00000082482 150 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm25401-201ENSMUST00000082975 106 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm22169-201ENSMUST00000083229 107 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm22744-201ENSMUST00000083444 65 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Gm10360-201ENSMUST00000097219 272 ntBASIC2.13□□□□□ -2.07
Rpl35aO55142 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Rpl35aO55142 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rpl35aO55142 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm25168-201ENSMUST00000104189 132 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm17166-201ENSMUST00000172006 431 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm24390-201ENSMUST00000179578 62 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Mir6376-201ENSMUST00000185149 131 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.12□□□□□ -2.07
Rpl35aO55142 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm45445-201ENSMUST00000209586 232 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm46233-201ENSMUST00000217831 449 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm24615-201ENSMUST00000083268 113 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Gm26175-201ENSMUST00000083794 131 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rpl35aO55142 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Rpl35aO55142 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.12□□□□□ -2.07
Rpl35aO55142 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Rpl35aO55142 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm25466-201ENSMUST00000103995 132 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm25539-201ENSMUST00000116886 122 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm11598-201ENSMUST00000119257 357 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm11471-201ENSMUST00000121824 198 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm23325-201ENSMUST00000157422 129 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm25424-201ENSMUST00000157612 58 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm26405-201ENSMUST00000158495 100 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm26022-201ENSMUST00000158663 108 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm20438-201ENSMUST00000174441 329 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm24813-201ENSMUST00000175310 84 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm23268-201ENSMUST00000175494 78 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm42807-201ENSMUST00000200141 329 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm18617-201ENSMUST00000222311 259 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm25204-201ENSMUST00000082843 106 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.11□□□□□ -2.07
Rpl35aO55142 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms