Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mir340-201ENSMUST00000083483 98 ntBASIC1.88□□□□□ -2.11
Trav13d-3J3QMG8 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.88□□□□□ -2.11
Trav13d-3J3QMG8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav13d-3J3QMG8 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.88□□□□□ -2.11
Trav13d-3J3QMG8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav13d-3J3QMG8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm24116-201ENSMUST00000103975 107 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm23015-201ENSMUST00000104145 128 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm12721-201ENSMUST00000120621 268 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm12924-201ENSMUST00000121747 318 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm24010-201ENSMUST00000157731 282 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm18546-201ENSMUST00000197245 676 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm43587-201ENSMUST00000199590 204 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm44477-201ENSMUST00000199661 110 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm45456-201ENSMUST00000210841 243 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm26447-201ENSMUST00000082448 129 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm23055-201ENSMUST00000082805 94 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm25789-201ENSMUST00000083294 76 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Snora69-201ENSMUST00000083708 131 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm24698-201ENSMUST00000083883 130 ntBASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
Trav13d-3J3QMG8 Gm23941-201ENSMUST00000101953 107 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm11322-201ENSMUST00000118095 435 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm12143-201ENSMUST00000119666 332 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm14588-201ENSMUST00000119895 172 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm13967-201ENSMUST00000120404 380 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm22159-201ENSMUST00000158412 130 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm22287-201ENSMUST00000083197 107 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.86□□□□□ -2.11
Trav13d-3J3QMG8 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm24629-201ENSMUST00000122762 89 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm22281-201ENSMUST00000157198 103 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm26150-201ENSMUST00000157426 151 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm24237-201ENSMUST00000157790 132 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm23033-201ENSMUST00000157996 134 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm25368-201ENSMUST00000158847 131 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm45445-201ENSMUST00000209586 232 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm45616-201ENSMUST00000211711 319 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm24355-201ENSMUST00000082858 122 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm24044-201ENSMUST00000083107 156 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Mir429-201ENSMUST00000083493 83 ntBASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav13d-3J3QMG8 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm15213-201ENSMUST00000122098 216 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm22215-201ENSMUST00000157558 96 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm23579-201ENSMUST00000158528 103 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm27540-201ENSMUST00000184950 187 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm37918-201ENSMUST00000192071 120 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm43220-201ENSMUST00000199299 282 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm42594-201ENSMUST00000199511 246 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm44256-201ENSMUST00000203304 335 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm46997-201ENSMUST00000222108 217 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.84□□□□□ -2.11
Trav13d-3J3QMG8 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Trav13d-3J3QMG8 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm26154-201ENSMUST00000102339 96 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm11794-201ENSMUST00000119446 237 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm27723-201ENSMUST00000157398 63 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm24858-201ENSMUST00000158058 323 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm22537-201ENSMUST00000158172 199 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm24510-201ENSMUST00000174965 94 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm24333-201ENSMUST00000175101 84 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Mir465d-201ENSMUST00000196314 58 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm42834-201ENSMUST00000196845 256 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm43035-201ENSMUST00000197626 517 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Snord43-201ENSMUST00000199549 108 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm25130-201ENSMUST00000082650 156 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm24163-201ENSMUST00000093660 132 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.83□□□□□ -2.12
Trav13d-3J3QMG8 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.82□□□□□ -2.12
Trav13d-3J3QMG8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.82□□□□□ -2.12
Trav13d-3J3QMG8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.82□□□□□ -2.12
Trav13d-3J3QMG8 Gm11471-201ENSMUST00000121824 198 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms