Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Gm21007-201ENSMUST00000221024 326 ntBASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Gm26493-201ENSMUST00000083155 136 ntBASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Pcdh1F7BJK1 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Pcdh1F7BJK1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm22270-201ENSMUST00000104034 132 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm12954-201ENSMUST00000118610 611 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Mir1934-201ENSMUST00000158127 83 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm23337-201ENSMUST00000158959 118 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm24304-201ENSMUST00000177635 107 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm44459-201ENSMUST00000203926 160 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm45080-201ENSMUST00000206648 283 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm25136-201ENSMUST00000083253 115 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm24616-201ENSMUST00000083274 139 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Gm23040-201ENSMUST00000083869 163 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.83□□□□□ -1.96
Pcdh1F7BJK1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Gm23320-201ENSMUST00000104462 127 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Gm6025-201ENSMUST00000121517 201 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Gm26477-201ENSMUST00000122617 323 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Gm27698-201ENSMUST00000184060 249 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Pcdh1F7BJK1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm22678-201ENSMUST00000116974 101 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm6952-201ENSMUST00000118629 159 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm22380-201ENSMUST00000157479 95 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm22961-201ENSMUST00000157964 106 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Mir1291-201ENSMUST00000199842 117 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm46233-201ENSMUST00000217831 449 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm23925-201ENSMUST00000082471 132 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Snora34-201ENSMUST00000083402 138 ntBASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Pcdh1F7BJK1 Gm24127-201ENSMUST00000104110 130 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm12213-201ENSMUST00000119924 353 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm12276-201ENSMUST00000121709 301 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm26049-201ENSMUST00000157313 108 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm23326-201ENSMUST00000157419 105 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm24314-201ENSMUST00000158274 123 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm25464-201ENSMUST00000175481 107 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm26061-201ENSMUST00000175584 108 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm37104-201ENSMUST00000193278 196 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm10025-201ENSMUST00000079568 372 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Snora7a-201ENSMUST00000082629 140 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm25815-201ENSMUST00000082755 107 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Mir101b-201ENSMUST00000083622 97 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm10161-201ENSMUST00000091506 204 ntBASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Pcdh1F7BJK1 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm25764-201ENSMUST00000104092 134 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm15214-201ENSMUST00000122155 470 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm23655-201ENSMUST00000122627 105 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm23865-201ENSMUST00000157723 97 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm25835-201ENSMUST00000158917 144 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Mir28b-201ENSMUST00000175399 80 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm9251-201ENSMUST00000197202 628 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm44425-201ENSMUST00000203739 429 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm9765-201ENSMUST00000043170 321 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Pcdh1F7BJK1 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Pcdh1F7BJK1 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.78□□□□□ -1.96
Pcdh1F7BJK1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms