Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm29308-201ENSMUST00000188863 315 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm23370-202ENSMUST00000197008 129 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 AC132446.1-201ENSMUST00000222655 226 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm15167-201ENSMUST00000121997 187 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Mir7667-201ENSMUST00000183866 63 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Gm18703-201ENSMUST00000215318 333 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Gm18696-201ENSMUST00000220103 274 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 CT485612.4-201ENSMUST00000223405 250 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 AC159380.1-201ENSMUST00000218096 121 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Gm26263-201ENSMUST00000083281 164 ntBASIC-0.2□□□□□ -2.44
Col6a3E9PWQ3 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm42855-201ENSMUST00000197388 253 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm43124-201ENSMUST00000201878 278 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm26377-201ENSMUST00000102184 108 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm23106-201ENSMUST00000157554 101 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm23090-201ENSMUST00000177331 78 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm35262-201ENSMUST00000215133 267 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm11252-201ENSMUST00000120572 939 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm26291-201ENSMUST00000158889 137 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 CT030194.2-201ENSMUST00000225752 379 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Snora62-201ENSMUST00000082991 149 ntBASIC-0.21□□□□□ -2.44
Col6a3E9PWQ3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm37578-201ENSMUST00000192256 1177 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm31520-201ENSMUST00000203048 733 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm23423-201ENSMUST00000082782 106 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm23032-201ENSMUST00000157995 107 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm24573-201ENSMUST00000175499 112 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm37693-201ENSMUST00000194562 234 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm23846-201ENSMUST00000083835 107 ntBASIC-0.22□□□□□ -2.44
Col6a3E9PWQ3 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm24366-201ENSMUST00000175383 86 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm24388-201ENSMUST00000177872 107 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm21758-201ENSMUST00000179336 819 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 AC132104.1-201ENSMUST00000213615 260 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm38388-201ENSMUST00000195569 1430 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm16400-201ENSMUST00000116523 1029 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm21894-201ENSMUST00000179631 546 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm20923-201ENSMUST00000190009 319 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm21088-201ENSMUST00000190875 316 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm44041-201ENSMUST00000203678 396 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm43898-201ENSMUST00000204456 424 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Mir183-201ENSMUST00000083685 70 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm37599-201ENSMUST00000193067 489 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm44050-201ENSMUST00000204263 527 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Col6a3E9PWQ3 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm13454-201ENSMUST00000118166 483 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm25115-201ENSMUST00000157187 140 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm38154-201ENSMUST00000195444 340 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Mir468-201ENSMUST00000197332 78 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm13343-201ENSMUST00000116474 105 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm28838-201ENSMUST00000186338 315 ntBASIC-0.24□□□□□ -2.45
Col6a3E9PWQ3 Gm29635-201ENSMUST00000187221 315 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms