Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm14600-201ENSMUST00000121032 630 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 n-R5s188-201ENSMUST00000122646 105 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm25750-201ENSMUST00000175483 112 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm37361-201ENSMUST00000194345 132 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 AC122834.1-201ENSMUST00000227182 425 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Mir214-201ENSMUST00000083582 110 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.5□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm24142-201ENSMUST00000101960 107 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Mir670-201ENSMUST00000102380 100 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm24510-201ENSMUST00000174965 94 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Mir191-201ENSMUST00000196210 74 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 AC069561.3-201ENSMUST00000217321 114 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 AC120540.1-201ENSMUST00000221879 324 ntBASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
Trav4-3A0A0B4J1K1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm25170-201ENSMUST00000104191 129 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm14358-201ENSMUST00000118458 403 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm24523-201ENSMUST00000083965 132 ntBASIC-0.52□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm23542-201ENSMUST00000158208 96 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm44548-201ENSMUST00000208929 192 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Mir448-201ENSMUST00000083516 112 ntBASIC-0.53□□□□□ -2.49
Trav4-3A0A0B4J1K1 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm15177-201ENSMUST00000120491 577 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm15529-201ENSMUST00000121833 994 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23331-201ENSMUST00000157423 108 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm26349-201ENSMUST00000157530 130 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm44300-201ENSMUST00000196792 121 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm44052-201ENSMUST00000203382 396 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 AC101677.1-201ENSMUST00000218590 158 ntBASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm22673-201ENSMUST00000104415 131 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm5899-201ENSMUST00000071770 270 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23628-201ENSMUST00000082464 173 ntBASIC-0.55□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir7118-201ENSMUST00000197760 61 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23645-201ENSMUST00000083228 108 ntBASIC-0.56□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm14551-201ENSMUST00000120802 256 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24417-201ENSMUST00000178123 79 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24653-201ENSMUST00000178541 79 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm25934-201ENSMUST00000178642 79 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir6394-201ENSMUST00000184738 99 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm46136-201ENSMUST00000214730 565 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 AC159885.1-201ENSMUST00000222221 199 ntBASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms