Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm27991-201ENSMUST00000184804 137 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Gm43676-201ENSMUST00000197532 540 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Gm44429-201ENSMUST00000203542 186 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Gm6109-201ENSMUST00000223297 348 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Gm23462-201ENSMUST00000083264 104 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Mir301-201ENSMUST00000083655 86 ntBASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
H2afb1S4R1E0 Mir3096-201ENSMUST00000116685 71 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm15010-201ENSMUST00000117153 407 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm11854-201ENSMUST00000117839 446 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm12793-201ENSMUST00000119268 292 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm25961-201ENSMUST00000157174 135 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm23232-201ENSMUST00000157300 105 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm24847-201ENSMUST00000158032 108 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm21885-201ENSMUST00000178891 327 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm38060-201ENSMUST00000194822 464 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm43865-201ENSMUST00000204721 127 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm18991-201ENSMUST00000209225 746 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.9□□□□□ -2.11
H2afb1S4R1E0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm22062-201ENSMUST00000082563 107 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
H2afb1S4R1E0 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm22713-201ENSMUST00000116895 130 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm12351-201ENSMUST00000118727 292 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm13992-201ENSMUST00000120558 156 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Mir1898-201ENSMUST00000122643 83 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm20613-201ENSMUST00000175828 345 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm25933-201ENSMUST00000178943 108 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm27521-201ENSMUST00000184022 64 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm2719-201ENSMUST00000191929 444 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm42578-201ENSMUST00000199960 194 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm24152-201ENSMUST00000082764 163 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Gm23679-201ENSMUST00000083161 119 ntBASIC1.89□□□□□ -2.11
H2afb1S4R1E0 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23472-201ENSMUST00000101806 191 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Mir875-201ENSMUST00000104698 78 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm24907-201ENSMUST00000116932 128 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm22678-201ENSMUST00000116974 101 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm13885-201ENSMUST00000117569 187 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm11794-201ENSMUST00000119446 237 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm13967-201ENSMUST00000120404 380 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm15213-201ENSMUST00000122098 216 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 U6.1-201ENSMUST00000157443 101 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23535-201ENSMUST00000157542 106 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm22315-201ENSMUST00000158010 143 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23759-201ENSMUST00000158351 268 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23581-201ENSMUST00000158531 63 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm24497-201ENSMUST00000177868 191 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm25939-201ENSMUST00000179876 191 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm43993-201ENSMUST00000203972 247 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm25589-201ENSMUST00000082502 166 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23444-201ENSMUST00000082922 191 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm23451-201ENSMUST00000083328 122 ntBASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
H2afb1S4R1E0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm26015-201ENSMUST00000104402 125 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm24984-201ENSMUST00000104454 133 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm25111-201ENSMUST00000116686 147 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm11862-201ENSMUST00000119678 659 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm11388-201ENSMUST00000120908 159 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm27723-201ENSMUST00000157398 63 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm24237-201ENSMUST00000157790 132 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm25658-201ENSMUST00000158472 128 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm27332-201ENSMUST00000184893 112 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm44182-201ENSMUST00000204052 115 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms