Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mir6951-201ENSMUST00000183910 75 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm37404-201ENSMUST00000195726 359 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Mir3068-202ENSMUST00000197755 79 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm44666-201ENSMUST00000208544 391 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm14748-201ENSMUST00000119819 411 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm25368-201ENSMUST00000158847 131 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm24487-201ENSMUST00000178017 63 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm26180-201ENSMUST00000179942 107 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Mir6399-201ENSMUST00000184050 84 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm28418-201ENSMUST00000186179 423 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm18991-201ENSMUST00000209225 746 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Mir30d-201ENSMUST00000083503 82 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm14972-201ENSMUST00000121780 364 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm22479-201ENSMUST00000122566 81 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm26149-201ENSMUST00000157432 108 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm24726-201ENSMUST00000158232 121 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Gm23454-201ENSMUST00000083332 133 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Snora33-201ENSMUST00000093556 129 ntBASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Scn5aQ9JJV9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm11935-201ENSMUST00000118608 399 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm26102-201ENSMUST00000157251 284 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm24737-201ENSMUST00000158861 100 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Mir195b-201ENSMUST00000184814 97 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm44654-201ENSMUST00000208052 329 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm17990-201ENSMUST00000211728 553 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm22062-201ENSMUST00000082563 107 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm11859-201ENSMUST00000118099 455 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm14980-201ENSMUST00000121247 736 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm15281-201ENSMUST00000125181 351 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm22843-201ENSMUST00000157710 134 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm27510-201ENSMUST00000158214 64 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm28257-201ENSMUST00000185244 463 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm37923-201ENSMUST00000191624 161 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Mir93-201ENSMUST00000083593 88 ntBASIC1.66□□□□□ -2.14
Scn5aQ9JJV9 Gm24282-201ENSMUST00000104232 66 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Gm13378-201ENSMUST00000117483 336 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Gm14269-201ENSMUST00000120455 306 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Gm14215-201ENSMUST00000120578 221 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Mir7661-201ENSMUST00000197023 61 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Gm23851-201ENSMUST00000083831 103 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 BC022960-201ENSMUST00000119987 1815 ntBASIC1.65□□□□□ -2.15
Scn5aQ9JJV9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm24275-201ENSMUST00000116780 146 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm23779-201ENSMUST00000157938 64 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm22435-201ENSMUST00000158552 128 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm24618-201ENSMUST00000177718 94 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm23953-201ENSMUST00000178214 94 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm26332-201ENSMUST00000179813 94 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm22863-201ENSMUST00000180265 94 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29512-201ENSMUST00000185544 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28110-201ENSMUST00000185782 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29057-201ENSMUST00000186468 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29661-201ENSMUST00000186781 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28737-201ENSMUST00000186808 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29118-201ENSMUST00000186908 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28433-201ENSMUST00000187085 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28759-201ENSMUST00000187621 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28831-201ENSMUST00000187739 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28752-201ENSMUST00000188340 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28569-201ENSMUST00000188748 315 ntBASIC1.64□□□□□ -2.15
Scn5aQ9JJV9 Gm28120-201ENSMUST00000188812 315 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms