Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm6829-201ENSMUST00000119858 360 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm11471-201ENSMUST00000121824 198 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm25115-201ENSMUST00000157187 140 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm23901-201ENSMUST00000157570 107 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm25012-201ENSMUST00000158396 164 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm28627-201ENSMUST00000186141 453 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm45543-201ENSMUST00000209327 88 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm24966-201ENSMUST00000082443 79 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm22154-201ENSMUST00000083844 131 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cthrc1Q9D1D6 Mir541-201ENSMUST00000102097 90 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm24122-201ENSMUST00000104107 132 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm14922-201ENSMUST00000121131 163 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm42774-201ENSMUST00000198854 283 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm44533-201ENSMUST00000207782 268 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm24163-201ENSMUST00000093660 132 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.53□□□□□ -2
Cthrc1Q9D1D6 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Cthrc1Q9D1D6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Cthrc1Q9D1D6 Gm26249-201ENSMUST00000116708 118 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm12721-201ENSMUST00000120621 268 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm23599-201ENSMUST00000157261 251 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm25059-201ENSMUST00000157367 117 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm25020-201ENSMUST00000178071 107 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm26265-202ENSMUST00000196326 133 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm44966-201ENSMUST00000208096 157 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm18991-201ENSMUST00000209225 746 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm45508-201ENSMUST00000209298 299 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm45445-201ENSMUST00000209586 232 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm10092-201ENSMUST00000077110 180 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm22299-201ENSMUST00000082663 136 ntBASIC2.52□□□□□ -2.01
Cthrc1Q9D1D6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Mir344c-201ENSMUST00000103919 92 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm23128-201ENSMUST00000104257 132 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm22674-201ENSMUST00000104413 131 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm6954-201ENSMUST00000117416 225 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm12797-201ENSMUST00000118645 273 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm24291-201ENSMUST00000157633 162 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Snord53-201ENSMUST00000175146 78 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm22800-201ENSMUST00000175627 94 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm23128-202ENSMUST00000196578 133 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm20144-201ENSMUST00000203031 165 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.51□□□□□ -2.01
Cthrc1Q9D1D6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm12926-201ENSMUST00000121158 409 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm22883-201ENSMUST00000157376 106 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm22145-201ENSMUST00000157396 148 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm25939-201ENSMUST00000179876 191 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm27761-201ENSMUST00000184091 131 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Mir6481-201ENSMUST00000184617 110 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm26495-201ENSMUST00000083152 137 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm25789-201ENSMUST00000083294 76 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Gm23264-201ENSMUST00000083372 107 ntBASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cthrc1Q9D1D6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms