Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 DQ267100-201ENSMUST00000122600 72 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm22215-201ENSMUST00000157558 96 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm28020-201ENSMUST00000157739 67 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm2962-201ENSMUST00000159266 336 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm26200-201ENSMUST00000180273 79 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm27220-201ENSMUST00000183453 262 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm27540-201ENSMUST00000184950 187 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm29014-201ENSMUST00000191422 326 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Gm23462-201ENSMUST00000083264 104 ntBASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ushbp1Q8R370 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm23128-201ENSMUST00000104257 132 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm22336-201ENSMUST00000157719 107 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm23219-201ENSMUST00000158123 87 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm16584-201ENSMUST00000159267 189 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm16326-201ENSMUST00000162843 414 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm27330-201ENSMUST00000184689 132 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm23128-202ENSMUST00000196578 133 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Gm45907-201ENSMUST00000213023 193 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ushbp1Q8R370 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm25421-201ENSMUST00000104218 164 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Trav20-201ENSMUST00000142754 347 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm24879-201ENSMUST00000158386 143 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm24922-201ENSMUST00000158511 102 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm6788-201ENSMUST00000166459 270 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm23190-201ENSMUST00000180307 64 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm28647-201ENSMUST00000188416 197 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.05□□□□□ -1.92
Ushbp1Q8R370 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.05□□□□□ -1.92
Ushbp1Q8R370 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm12304-201ENSMUST00000120312 385 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm22192-201ENSMUST00000175128 85 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Mir7242-201ENSMUST00000183710 79 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm29005-201ENSMUST00000186773 320 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Trbv6-201ENSMUST00000193743 276 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm44429-201ENSMUST00000203542 186 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm10092-201ENSMUST00000077110 180 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Snord47-201ENSMUST00000083034 77 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm25632-201ENSMUST00000083112 85 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm23264-201ENSMUST00000083372 107 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm23040-201ENSMUST00000083869 163 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.04□□□□□ -1.92
Ushbp1Q8R370 Mir542-201ENSMUST00000102186 85 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm25500-201ENSMUST00000104426 123 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm6897-201ENSMUST00000117714 138 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm14758-201ENSMUST00000119104 138 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm24594-201ENSMUST00000122502 99 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm25115-201ENSMUST00000157187 140 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm24388-201ENSMUST00000177872 107 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm23002-201ENSMUST00000179221 107 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm28627-201ENSMUST00000186141 453 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm29022-201ENSMUST00000190702 225 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm44024-201ENSMUST00000203008 476 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.03□□□□□ -1.92
Ushbp1Q8R370 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm23377-201ENSMUST00000082943 126 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm24204-201ENSMUST00000082950 107 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm23461-201ENSMUST00000083265 107 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm22973-201ENSMUST00000083298 191 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ushbp1Q8R370 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.03□□□□□ -1.92
Ushbp1Q8R370 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm24121-201ENSMUST00000102029 106 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm26473-201ENSMUST00000116763 127 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm22482-201ENSMUST00000122563 359 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm26279-201ENSMUST00000157095 102 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm24750-201ENSMUST00000157843 104 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Mir8116-201ENSMUST00000184134 97 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Gm27786-201ENSMUST00000184337 70 ntBASIC3.02□□□□□ -1.93
Ushbp1Q8R370 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms