Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.13□□□□□ -2.39
Col6a6Q8C6K9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm11904-201ENSMUST00000120562 248 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm25294-201ENSMUST00000122791 104 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm24296-201ENSMUST00000158297 106 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm22668-201ENSMUST00000158716 260 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm24969-201ENSMUST00000180331 79 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm5116-201ENSMUST00000187732 463 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm6003-201ENSMUST00000187903 463 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm29627-201ENSMUST00000187984 463 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm42570-201ENSMUST00000195937 292 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
Col6a6Q8C6K9 Gm12797-201ENSMUST00000118645 273 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm24836-201ENSMUST00000122609 108 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm22607-201ENSMUST00000158291 105 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm44088-201ENSMUST00000204595 237 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm22974-201ENSMUST00000083301 103 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm12045-201ENSMUST00000122122 573 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm23854-201ENSMUST00000158378 108 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm22942-201ENSMUST00000158563 124 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm18160-201ENSMUST00000214279 827 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.11□□□□□ -2.39
Col6a6Q8C6K9 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm15177-201ENSMUST00000120491 577 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm15379-201ENSMUST00000121224 648 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm23538-201ENSMUST00000157535 101 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm8114-201ENSMUST00000172225 484 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm26914-201ENSMUST00000182262 223 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm34073-201ENSMUST00000195736 212 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm42855-201ENSMUST00000197388 253 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm44429-201ENSMUST00000203542 186 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm23452-201ENSMUST00000083327 107 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Mir214-201ENSMUST00000083582 110 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm23741-201ENSMUST00000097237 171 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm22595-201ENSMUST00000104250 130 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm7429-201ENSMUST00000118664 348 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm25914-201ENSMUST00000157618 153 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm25413-201ENSMUST00000158544 312 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm25643-201ENSMUST00000158874 103 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm24388-201ENSMUST00000177872 107 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm28409-201ENSMUST00000187064 103 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm37319-201ENSMUST00000193500 636 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Gm45101-201ENSMUST00000208327 232 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.1□□□□□ -2.39
Col6a6Q8C6K9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.09□□□□□ -2.39
Col6a6Q8C6K9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.09□□□□□ -2.39
Col6a6Q8C6K9 Gm26011-201ENSMUST00000104410 104 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm15175-201ENSMUST00000117629 132 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm11386-201ENSMUST00000117761 347 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm25012-201ENSMUST00000158396 164 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm21894-201ENSMUST00000179631 546 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm29513-201ENSMUST00000185741 202 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm20923-201ENSMUST00000190009 319 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm21088-201ENSMUST00000190875 316 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm43583-201ENSMUST00000199235 303 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Mir362-201ENSMUST00000093592 65 ntBASIC0.09□□□□□ -2.4
Col6a6Q8C6K9 Gm11813-201ENSMUST00000118586 291 ntBASIC0.08□□□□□ -2.4
Col6a6Q8C6K9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.08□□□□□ -2.4
Col6a6Q8C6K9 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
Col6a6Q8C6K9 Gm24137-201ENSMUST00000180055 79 ntBASIC0.08□□□□□ -2.4
Col6a6Q8C6K9 Gm22391-201ENSMUST00000180356 79 ntBASIC0.08□□□□□ -2.4
Col6a6Q8C6K9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms