Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Trim47Q8C0E3 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm22031-201ENSMUST00000116945 126 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm15069-201ENSMUST00000117792 192 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm15068-201ENSMUST00000119796 192 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm15214-201ENSMUST00000122155 470 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm26253-201ENSMUST00000122493 103 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm23667-201ENSMUST00000157466 120 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm23755-201ENSMUST00000157578 343 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm28650-201ENSMUST00000188413 411 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm44256-201ENSMUST00000203304 335 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Trim47Q8C0E3 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Gm23535-201ENSMUST00000157542 106 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Gm25367-201ENSMUST00000158846 106 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Gm43217-201ENSMUST00000199513 367 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim47Q8C0E3 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Snord100-201ENSMUST00000116836 74 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm23123-201ENSMUST00000157648 144 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm24727-201ENSMUST00000158231 144 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm22516-201ENSMUST00000158266 124 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm22443-201ENSMUST00000082890 107 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.94□□□□□ -1.78
Trim47Q8C0E3 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm25376-201ENSMUST00000104340 133 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm23788-201ENSMUST00000122535 106 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm22988-201ENSMUST00000122759 144 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm25835-201ENSMUST00000158917 144 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm26460-201ENSMUST00000175061 126 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm22192-201ENSMUST00000175128 85 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm25535-201ENSMUST00000175364 125 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm37377-201ENSMUST00000191733 304 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm11351-202ENSMUST00000225724 478 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm25632-201ENSMUST00000083112 85 ntBASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trim47Q8C0E3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm22957-201ENSMUST00000122511 123 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm23183-201ENSMUST00000122595 323 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm25633-201ENSMUST00000178565 107 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Mir6371-201ENSMUST00000184470 111 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm21064-202ENSMUST00000190583 278 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm21007-201ENSMUST00000221024 326 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm22805-201ENSMUST00000082739 107 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Gm26175-201ENSMUST00000083794 131 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim47Q8C0E3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Mir673-201ENSMUST00000102361 91 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm22590-201ENSMUST00000104247 128 ntBASIC3.91□□□□□ -1.78
Trim47Q8C0E3 Gm14502-201ENSMUST00000118154 113 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms