Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm12304-201ENSMUST00000120312 385 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm11204-201ENSMUST00000122438 147 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm23470-201ENSMUST00000157129 120 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm25599-201ENSMUST00000157816 103 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Snord53-201ENSMUST00000175146 78 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Mir3103-201ENSMUST00000175474 67 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Mir5136-201ENSMUST00000175573 76 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Mir8103-201ENSMUST00000183945 107 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm29658-201ENSMUST00000185404 230 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm44256-201ENSMUST00000203304 335 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm44563-201ENSMUST00000207958 178 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm46993-201ENSMUST00000220708 259 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm4945-201ENSMUST00000075152 453 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sh3rf2Q8BZT2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm24670-201ENSMUST00000104154 132 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm15282-201ENSMUST00000117707 300 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm22989-201ENSMUST00000158313 86 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm22858-201ENSMUST00000174972 76 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Mir669k-201ENSMUST00000177742 127 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm23963-201ENSMUST00000179603 77 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm25673-201ENSMUST00000179957 127 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Mir208a-201ENSMUST00000083498 83 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm26327-201ENSMUST00000093724 111 ntBASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sh3rf2Q8BZT2 Gm14073-201ENSMUST00000117344 381 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm14402-201ENSMUST00000122217 508 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm12443-201ENSMUST00000122308 323 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22217-201ENSMUST00000157556 313 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm23277-201ENSMUST00000157914 136 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22853-201ENSMUST00000174974 131 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm24167-201ENSMUST00000177733 124 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm24028-201ENSMUST00000178991 124 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm44859-201ENSMUST00000207831 94 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm25813-201ENSMUST00000082748 191 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm23264-201ENSMUST00000083372 107 ntBASIC2.65□□□□□ -1.99
Sh3rf2Q8BZT2 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm24075-201ENSMUST00000158175 72 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm25920-201ENSMUST00000158307 99 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22767-201ENSMUST00000158365 165 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm23409-201ENSMUST00000158516 237 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm25071-201ENSMUST00000175232 70 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm28825-201ENSMUST00000186233 238 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Trbv7-201ENSMUST00000193339 402 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Trbv6-201ENSMUST00000193743 276 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22507-201ENSMUST00000082773 160 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Mir302d-201ENSMUST00000083513 66 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Mir384-201ENSMUST00000083565 88 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Gm10360-201ENSMUST00000097219 272 ntBASIC2.64□□□□□ -1.99
Sh3rf2Q8BZT2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm12550-201ENSMUST00000118478 329 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm14215-201ENSMUST00000120578 221 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm24716-201ENSMUST00000157524 104 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm23536-201ENSMUST00000157541 134 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm16289-201ENSMUST00000162079 183 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm25476-201ENSMUST00000175125 185 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm27698-201ENSMUST00000184060 249 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm44922-201ENSMUST00000206690 90 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Gm18346-201ENSMUST00000216782 325 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Sh3rf2Q8BZT2 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Sh3rf2Q8BZT2 Gm14020-201ENSMUST00000118165 662 ntBASIC2.62□□□□□ -1.99
Sh3rf2Q8BZT2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.62□□□□□ -1.99
Sh3rf2Q8BZT2 Gm22560-201ENSMUST00000157332 120 ntBASIC2.62□□□□□ -1.99
Sh3rf2Q8BZT2 Gm17067-202ENSMUST00000180131 123 ntBASIC2.62□□□□□ -1.99
Sh3rf2Q8BZT2 Mir6370-201ENSMUST00000183510 120 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms