Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25066-201ENSMUST00000158145 123 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22665-201ENSMUST00000158720 275 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25364-201ENSMUST00000158851 107 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25098-201ENSMUST00000177580 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23356-201ENSMUST00000177610 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24027-201ENSMUST00000177611 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22511-201ENSMUST00000177628 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22630-201ENSMUST00000177781 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23560-201ENSMUST00000177782 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25462-201ENSMUST00000177833 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26059-201ENSMUST00000177865 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22255-201ENSMUST00000177933 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25146-201ENSMUST00000177976 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25523-201ENSMUST00000178044 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24585-201ENSMUST00000178104 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22627-201ENSMUST00000178127 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22912-201ENSMUST00000178242 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24866-201ENSMUST00000178338 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22524-201ENSMUST00000178357 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25710-201ENSMUST00000178367 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23575-201ENSMUST00000178406 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24872-201ENSMUST00000178434 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22449-201ENSMUST00000178924 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24702-201ENSMUST00000178965 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24206-201ENSMUST00000179011 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24528-201ENSMUST00000179164 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22909-201ENSMUST00000179190 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26334-201ENSMUST00000179403 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25463-201ENSMUST00000179405 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25742-201ENSMUST00000179530 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25209-201ENSMUST00000179576 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26392-201ENSMUST00000179661 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25230-201ENSMUST00000179740 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26434-201ENSMUST00000179778 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25741-201ENSMUST00000179825 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24759-201ENSMUST00000179827 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24219-201ENSMUST00000179861 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm44320-201ENSMUST00000199276 86 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm36776-201ENSMUST00000207006 203 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Mir186-201ENSMUST00000083497 71 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23254-201ENSMUST00000097244 79 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26135-201ENSMUST00000101993 72 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26011-201ENSMUST00000104410 104 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm12351-201ENSMUST00000118727 292 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23716-201ENSMUST00000157348 144 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm27396-201ENSMUST00000157708 58 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22850-201ENSMUST00000157714 82 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm22943-201ENSMUST00000158564 76 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Snord50b-201ENSMUST00000178497 72 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm27793-201ENSMUST00000183405 76 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm43587-201ENSMUST00000199590 204 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm15235-201ENSMUST00000200572 194 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm9765-201ENSMUST00000043170 321 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.39□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25022-201ENSMUST00000102205 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24582-201ENSMUST00000103967 103 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm24232-201ENSMUST00000104314 132 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25060-201ENSMUST00000157374 130 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23592-201ENSMUST00000157859 117 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23817-201ENSMUST00000158449 104 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm23182-201ENSMUST00000158688 135 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm26160-201ENSMUST00000158965 63 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm16289-201ENSMUST00000162079 183 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm25646-201ENSMUST00000178527 79 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 AF357428-201ENSMUST00000083815 69 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Sh3rf1Q69ZI1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms