Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm23716-201ENSMUST00000157348 144 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm26414-201ENSMUST00000157674 269 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Mir6371-201ENSMUST00000184470 111 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm28627-201ENSMUST00000186141 453 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm29429-201ENSMUST00000187071 121 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Trbv7-201ENSMUST00000193339 402 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm26495-201ENSMUST00000083152 137 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim28Q62318 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
Trim28Q62318 Gm25529-201ENSMUST00000104850 92 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim28Q62318 Gm23752-201ENSMUST00000157584 115 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm24015-201ENSMUST00000157725 232 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Mir1967-201ENSMUST00000157789 82 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm24959-201ENSMUST00000157924 146 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm22606-201ENSMUST00000158290 103 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm16162-201ENSMUST00000162296 297 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Mir3103-201ENSMUST00000175474 67 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Gm27520-201ENSMUST00000184872 81 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim28Q62318 Gm45687-201ENSMUST00000209454 155 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim28Q62318 Gm23042-201ENSMUST00000083866 101 ntBASIC3.3□□□□□ -1.88
Trim28Q62318 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Trim28Q62318 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Trim28Q62318 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim28Q62318 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim28Q62318 Gm22003-201ENSMUST00000101885 107 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm13343-201ENSMUST00000116474 105 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm13756-201ENSMUST00000117618 222 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm11334-201ENSMUST00000121969 156 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm12443-201ENSMUST00000122308 323 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm23642-201ENSMUST00000157858 258 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm24086-201ENSMUST00000175171 98 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm22756-201ENSMUST00000180118 107 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim28Q62318 Gm37796-201ENSMUST00000195327 134 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm43955-201ENSMUST00000204332 142 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim28Q62318 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm25856-201ENSMUST00000082786 75 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm26054-201ENSMUST00000083037 107 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm24492-201ENSMUST00000083798 107 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm10360-201ENSMUST00000097219 272 ntBASIC3.29□□□□□ -1.88
Trim28Q62318 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim28Q62318 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim28Q62318 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim28Q62318 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim28Q62318 Gm16171-201ENSMUST00000118004 324 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm12617-201ENSMUST00000121268 381 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm26275-201ENSMUST00000157101 268 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm22349-201ENSMUST00000157864 107 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Mir5118-201ENSMUST00000175551 67 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm25935-201ENSMUST00000178746 107 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm27761-201ENSMUST00000184091 131 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Mir21b-201ENSMUST00000184317 108 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm22294-201ENSMUST00000083308 104 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm25651-201ENSMUST00000083782 119 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim28Q62318 Mir127-201ENSMUST00000093568 70 ntBASIC3.28□□□□□ -1.88
Trim28Q62318 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Trim28Q62318 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim28Q62318 Gm26293-201ENSMUST00000104170 84 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm26342-201ENSMUST00000104557 129 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm11253-201ENSMUST00000118486 201 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm13992-201ENSMUST00000120558 156 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm24212-201ENSMUST00000158258 132 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm22767-201ENSMUST00000158365 165 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm25162-201ENSMUST00000158906 159 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Mir465d-201ENSMUST00000196314 58 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.27□□□□□ -1.89
Trim28Q62318 Snord80-202ENSMUST00000199023 77 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm45013-201ENSMUST00000206883 178 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Gm44563-201ENSMUST00000207958 178 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 AF357341-201ENSMUST00000083088 75 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.27□□□□□ -1.89
Trim28Q62318 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim28Q62318 Gm14593-201ENSMUST00000119948 294 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm14551-201ENSMUST00000120802 256 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm25985-201ENSMUST00000122677 107 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm22215-201ENSMUST00000157558 96 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim28Q62318 Gm23963-201ENSMUST00000179603 77 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm3852-201ENSMUST00000182781 264 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim28Q62318 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Gm24948-201ENSMUST00000082866 207 ntBASIC3.26□□□□□ -1.89
Trim28Q62318 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim28Q62318 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms